DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and crol

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:390 Identity:99/390 - (25%)
Similarity:152/390 - (38%) Gaps:90/390 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 KNEQVEEDG-----------IIEEV------YDVYETYEGDLIPDQGYDHEMADQALSELSAEIE 229
            |:|. :|||           .||::      ::|:....||::     :|::|.....:|.....
  Fly    35 KSEH-KEDGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVV-----NHQLAAAHGGQLPPPPP 93

  Fly   230 YLDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVE 294
            ...||.....:.:|....|..: |:.....:.|.:..|:..|..:....:.|..|......|.|.
  Fly    94 LPPQVTSHAASAAAAAAAASTN-NAAVAAVMASANAAAAAAAAASAGGGLPPATSGNGGQQVTVT 157

  Fly   295 SSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDI-----------SIGEVLARKHSGIKTKGGH 348
            :::|.|:..|:  ....|.:.:||..:..|.|..|           ..|:.:|....|.....|.
  Fly   158 TTSSSTSSGGS--TTSGGTTTTAGELLMPKMEGGIHGVDGSGNGGNGGGQNVALAPDGTPIATGT 220

  Fly   349 KI--LLGDKKEFKY---------------ICDVCG----------------------------NM 368
            .:  :.|...:|:|               :|.|||                            |:
  Fly   221 HVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNV 285

  Fly   369 YPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNK 433
            :.:.:.|..|:|.||..||..|.||...||:.:.|..|..:|||..|::|.||...|........
  Fly   286 FANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVN 350

  Fly   434 HHRIHTNERPYECDVCHKTFT----YTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIH 494
            |.|.||.|.|:.||:|.|:||    |.|    |.|.|||:.||.||||||.:.:...|.||...|
  Fly   351 HVRKHTGETPHRCDICKKSFTRKEHYVN----HYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSH 411

  Fly   495  494
              Fly   412  411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 8/47 (17%)
COG5048 386..>447 CDD:227381 23/60 (38%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
SFP1 <424..491 CDD:227516 30/70 (43%)
C2H2 Zn finger 446..466 CDD:275368 10/23 (43%)
C2H2 Zn finger 474..494 CDD:275368 9/19 (47%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368 3/19 (16%)
C2H2 Zn finger 251..271 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..299 CDD:275368 4/19 (21%)
COG5048 300..723 CDD:227381 49/116 (42%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 335..355 CDD:275368 6/19 (32%)
C2H2 Zn finger 363..383 CDD:275368 10/23 (43%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 475..495 CDD:275368
C2H2 Zn finger 503..523 CDD:275368
C2H2 Zn finger 531..551 CDD:275368
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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