DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and LOC3290708

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_563202.4 Gene:LOC3290708 / 3290708 VectorBaseID:AGAMI1_007329 Length:352 Species:Anopheles gambiae


Alignment Length:482 Identity:102/482 - (21%)
Similarity:163/482 - (33%) Gaps:167/482 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TSTQKWIVCRVCLQ-QPKEPMASIF----NDDSEKDLTHMIRECGGVPIKQFDHYPDKICEKCFK 74
            |.|.....||:||. ...|....|:    ...||......|::...|.:......|.|||..|..
Mosquito    12 TITSFTTCCRLCLSCSESEDYYDIYLSSIASHSETTFVEAIQKITNVELISNSKLPSKICRNCAA 76

  Fly    75 VLKMAFKFRETCQRSYGHLRQFVGPVEVEQRPPEKKGSETATKLEPDVDPDEAEQEPEHDEEDED 139
            .:..||.|          :|.|               ..|...|:..:|.:|.::     ||.|:
Mosquito    77 RIDDAFCF----------VRDF---------------HRTNEMLQNYLDNEECDK-----EEAEE 111

  Fly   140 VDLDESHYAEADDAAETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEG 204
            :||.                                               .::|:.:: :..:.
Mosquito   112 IDLT-----------------------------------------------TVQELCEL-DLTDQ 128

  Fly   205 DLIPDQGYDHEMADQALSELSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASI 269
            .::.|:..::|                   :.:...||.|.||.::                  :
Mosquito   129 QIVTDEENENE-------------------QREGSKESEHPDDEQL------------------V 156

  Fly   270 HARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGEV 334
            |.|:.|..    :.|.|:....||:....:.|.  :|.|.:|                       
Mosquito   157 HQRHDTPE----QPSGTNRGLTAVDFILQQITT--SPQKKKR----------------------- 192

  Fly   335 LARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQ 399
                             ..||...|:.|:.|...:..:|.|.:|:::|:.:|...|:.|...|.|
Mosquito   193 -----------------RPDKSALKHQCNECDKSFLRRSNLVDHLRLHAQLKVFACDFCDKRFVQ 240

  Fly   400 AQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKM 464
            :..|..||.|||..|||:||.|...|...|....|...|||.:|:.||||.|.|..::.|..||:
Mosquito   241 SGNLKSHMRTHTAERPYRCSMCQKGFTQSSALKTHMLAHTNTKPFACDVCDKAFVSSSDLCKHKL 305

  Fly   465 IHTGEKPHVCDVC-GKGFPQAYKLRNH 490
            .|:.:|.:.|.:| .:.|.|...||||
Mosquito   306 THSAQKRYRCVICPERFFTQKVHLRNH 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871 18/77 (23%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
COG5048 386..>447 CDD:227381 24/60 (40%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
SFP1 <424..491 CDD:227516 26/68 (38%)
C2H2 Zn finger 446..466 CDD:275368 9/19 (47%)
C2H2 Zn finger 474..494 CDD:275368 8/18 (44%)
LOC3290708XP_563202.4 zf-AD 19..98 CDD:462262 22/103 (21%)
SFP1 <142..308 CDD:227516 58/229 (25%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
zf-H2C2_2 243..268 CDD:463886 13/24 (54%)
C2H2 Zn finger 259..279 CDD:275368 6/19 (32%)
C2H2 Zn finger 287..307 CDD:275368 9/19 (47%)
C2H2 Zn finger 315..337 CDD:275368 8/18 (44%)

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