DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and CG2202

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster


Alignment Length:742 Identity:156/742 - (21%)
Similarity:237/742 - (31%) Gaps:304/742 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VCRVCLQQP--KEPMASIFND---DSEKDLTHMIRECGGVPIKQFDHYPDKICEKCFKVLKMAFK 81
            ||||||:..  :..:..|||:   :.:.:|..::.||.....::.|..|..:|..|.:..:.|::
  Fly    45 VCRVCLKDVSLEGELHFIFNETPVEQDANLARILDECTLHQCERNDGMPPHMCSSCVEAARNAYR 109

  Fly    82 FRETCQRSYGHLRQFVGPVEVEQRPPEKK--GSETATKLEP------------------------ 120
            |:...:|||..|...:|      |.|:.|  |:|.|::.:.                        
  Fly   110 FKRHAERSYCSLVALLG------RSPQLKARGAEAASQTDQVALLPCEMCHDQFLNSLELRLHRN 168

  Fly   121 ----------------------------------------------------------------- 120
                                                                             
  Fly   169 QVHRTTKEATSAGTDGLPSEDFKCKFCPQHFPHLRQLRSHLARSHEQTARLQCAHCQRTFSRRDH 233

  Fly   121 ----------DVDPDEAEQEPEHDEE-------DE---------DVDLDESHYAEA--------- 150
                      ||:.|.....|..||.       ||         :.|.::....||         
  Fly   234 LLRHIRNQHRDVEEDLLRTWPPADENTMNSDGGDELVSAEVLLNEEDNEDEVVGEAFQCNTNPIS 298

  Fly   151 ---DDAAETQGG-------------VFHDEIEDGILVELEK----------------DRIVHVKN 183
               ||..|..|.             :..:|::..:.::|||                ||.  |||
  Fly   299 SNEDDGEEANGANQTLWLHIKPEPCLEAEEVDLAMQLKLEKKRRRREKAEAQAETSIDRT--VKN 361

  Fly   184 EQVEEDGIIEEVYDVYETYEGDLIPDQGYDHE----MADQALSELSAEIEYLDQ------VEHDQ 238
            |.:   .|.:..:.:.|  |..|:   |.|.|    :.|.....:|.|:...|:      .:.|.
  Fly   362 EHI---AIGDSQFSIKE--ENQLV---GSDDEAPMGVEDFMKLHVSGELPLSDEERFDGFADDDS 418

  Fly   239 LTESAHEDDAEVDLNSTEE-EF----------VPSKSVRASIHARNATKRRVNP----------- 281
            ..:...:||.|.|....:: ||          .|.|..::....|...|...||           
  Fly   419 DLDDDDDDDDEEDAGDDDDGEFRLKQEPLDGEKPLKKAKSGRRRRRRNKDEPNPDNRCEVCQRTF 483

  Fly   282 ----------------------------RRSATSTASV------------AVESSTSKTTDRGNP 306
                                        .||....|.|            ..|::.|: .|....
  Fly   484 SRHCHLLRHKLSHLEKKPHNCPHCPKAFARSDHLKAHVQSLHSNKEHKCSLCEAAFSR-LDALER 547

  Fly   307 LKVRRGNSD--SAGSKMSIK--------SEKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYI 361
            .||.:.|.:  ..||::.::        ..|..| .:...|||:.:.|            :|.|.
  Fly   548 HKVSKHNGEGLEPGSELKLQLAEHTCEYCSKRFS-SKTYLRKHTLLHT------------DFLYA 599

  Fly   362 CDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAF- 425
            |..|...:..:::|.||.|.|:|.:...|.|||..||:...|..||..|.|.:||||.:|..|| 
  Fly   600 CKTCDETFRERAQLREHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKAFP 664

  Fly   426 --ADLSTRNKHH-------------------------RIHTNERPYECDVCHKTFTYTNTLKFHK 463
              .||....::|                         |.||.||||:||.|.|:||.:|.||.|.
  Fly   665 RATDLKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHI 729

  Fly   464 MIHTGEKPHVCDVCGKGFPQAYKLRNH 490
            ..||||: :.|..|...|.|.|.:|||
  Fly   730 RRHTGER-YKCPHCDAYFLQLYNMRNH 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 22/77 (29%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
zf-H2C2_2 375..399 CDD:290200 11/23 (48%)
COG5048 386..>447 CDD:227381 28/88 (32%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
zf-H2C2_2 403..426 CDD:290200 12/25 (48%)
C2H2 Zn finger 418..438 CDD:275368 8/47 (17%)
zf-H2C2_2 432..455 CDD:290200 13/47 (28%)
C2H2 Zn finger 446..466 CDD:275368 10/19 (53%)
zf-H2C2_2 459..481 CDD:290200 9/21 (43%)
C2H2 Zn finger 474..494 CDD:275368 8/17 (47%)
CG2202NP_572657.2 zf-AD 45..121 CDD:285071 21/75 (28%)
C2H2 Zn finger 150..171 CDD:275368 0/20 (0%)
C2H2 Zn finger 192..213 CDD:275370 0/20 (0%)
C2H2 Zn finger 221..239 CDD:275370 0/17 (0%)
COG5048 <443..730 CDD:227381 72/300 (24%)
C2H2 Zn finger 476..496 CDD:275368 0/19 (0%)
zf-H2C2_2 488..513 CDD:290200 0/24 (0%)
C2H2 Zn finger 504..525 CDD:275368 4/20 (20%)
C2H2 Zn finger 532..548 CDD:275368 3/16 (19%)
C2H2 Zn finger 573..593 CDD:275368 5/20 (25%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
zf-H2C2_2 613..637 CDD:290200 11/23 (48%)
C2H2 Zn finger 628..648 CDD:275368 9/19 (47%)
zf-H2C2_2 640..663 CDD:290200 10/22 (45%)
C2H2 Zn finger 656..676 CDD:275368 6/19 (32%)
C2H2 Zn finger 684..704 CDD:275368 1/19 (5%)
zf-C2H2 684..704 CDD:278523 1/19 (5%)
zf-H2C2_2 696..721 CDD:290200 12/24 (50%)
C2H2 Zn finger 712..732 CDD:275368 10/19 (53%)
C2H2 Zn finger 739..755 CDD:275368 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457870
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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