DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and CG42726

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster


Alignment Length:272 Identity:60/272 - (22%)
Similarity:90/272 - (33%) Gaps:85/272 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 KVRRGNSDSAGSK-----------------------MSIKSEKDISIGEVLARKHSGIKTKGGHK 349
            |..|.|.|:.|..                       :..:..:.:.|.|.   :.:..:|....:
  Fly     3 KCPRCNCDATGQNRLVTDSCGHTKCRLCLVADVSDCLECRVARSVDIQET---QETQARTSADKR 64

  Fly   350 ILLGDK--------KEF------------------KYICDVCGNMYPSQSRLTEHIKVHSGVKPH 388
            |::.||        |:|                  |:.|..||..:.:.|.|..|:..|.....|
  Fly    65 IIVTDKGYHCTVCNKDFRSRTQQYYHLTCGNDLLKKFNCKECGRRFATSSHLKYHLMSHEKQSKH 129

  Fly   389 ECEICGHCFAQAQQLARHMNTHTGNR----------------------------PYKCSYCPAAF 425
            .|.:|...|.|...|.|||.||...:                            .:||..|...|
  Fly   130 SCSVCHKSFKQPIVLQRHMLTHNQEKHLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHF 194

  Fly   426 ADLSTRNKHHRIH-TNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGF--PQAY-- 485
            .:.:..|:|.|.| .|...:.|.||.|:|....||:.|...|:..:...|.:|||.:  |.|.  
  Fly   195 QNKANLNQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSYNDPDALGR 259

  Fly   486 KLRNHRVIHERR 497
            .||.|:.....|
  Fly   260 HLRQHKTAERYR 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
COG5048 386..>447 CDD:227381 20/89 (22%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
SFP1 <424..491 CDD:227516 23/71 (32%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 9/23 (39%)
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 2/19 (11%)
C2H2 Zn finger 103..123 CDD:275368 6/19 (32%)
COG5048 <112..288 CDD:227381 43/160 (27%)
C2H2 Zn finger 131..151 CDD:275368 8/19 (42%)
C2H2 Zn finger 158..178 CDD:275368 0/19 (0%)
C2H2 Zn finger 187..207 CDD:275368 6/19 (32%)
C2H2 Zn finger 216..236 CDD:275368 8/19 (42%)
C2H2 Zn finger 244..264 CDD:275368 8/19 (42%)
C2H2 Zn finger 272..290 CDD:275368 60/272 (22%)
Blue background indicates that the domain is not in the aligned region.

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