DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and CG10959

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:495 Identity:120/495 - (24%)
Similarity:195/495 - (39%) Gaps:122/495 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 MIRECGGVPIKQFD----HYPDKICEKCFKVL--KMAFKFRETC----QRSYG------HLRQFV 97
            |:|.|    :...|    |...::..||.::.  ..|.:|:..|    .:.:|      |:|.. 
  Fly     1 MLRHC----LANVDYVRLHAQQQLRPKCGEIFYEPEANRFQLVCLLCDMKHFGFEDFARHIRNV- 60

  Fly    98 GPVEVEQRPPEKKGSETATKL---------------EP-DVDPDEAEQEPEHDEEDEDVDLDESH 146
             ..:.:.||..|    |.|.|               || .||..:.|..|     :|||      
  Fly    61 -HFDKQGRPLTK----TVTGLGRLAREEQEFQGVSAEPLAVDSFKKEYLP-----NEDV------ 109

  Fly   147 YAEADDAAETQGGVFHDEIEDGILVELEKD-----RIVHVKNEQVEEDGIIEEVYDVYETYEGDL 206
            .:|.:||.:..|              ||:|     ||:.:..:|..::..|:.::..        
  Fly   110 LSEEEDAEQELG--------------LEQDEGNPLRIMVLGGKQSVDEETIDTMWQP-------- 152

  Fly   207 IPDQGYDHEMADQALSELSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIH- 270
                  ||:.:..:::| ...:|.|..||:.|        |.:.|.:..|.:.|..|..:...: 
  Fly   153 ------DHDSSSASVNE-GCALEALLGVENPQ--------DYQPDEDGEEHQSVFKKQRQPKDYN 202

  Fly   271 -----ARNATKRRVNPRRSATSTASVAVESSTSKTT---DRGNPLKVRRGNSDSAGSKMS--IKS 325
                 .|..|::.:|.....:.....|.:....|.|   ||......|:.:::.|.....  .||
  Fly   203 CPHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHTEFACQLCDKVFKS 267

  Fly   326 EKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHEC 390
            .:.: :..|  :.|||.:|             ||...:.||..:.:|..||.|.:|||..:.:.|
  Fly   268 SRSL-LRHV--QGHSGART-------------FKCEHENCGKSFVNQHNLTSHRRVHSEERNYVC 316

  Fly   391 EICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTY 455
            |:||:.....:.|..|..||||.:|::|..|...||..|..|:|..:|:.|:||:||.|...|:.
  Fly   317 ELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSR 381

  Fly   456 TNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIHE 495
            ...|..||.:|.|.|...|.:||..:.||..|..|...|:
  Fly   382 PKALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAHK 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 12/61 (20%)
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
zf-H2C2_2 375..399 CDD:290200 10/23 (43%)
COG5048 386..>447 CDD:227381 22/60 (37%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 9/22 (41%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
zf-H2C2_2 432..455 CDD:290200 10/22 (45%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
zf-H2C2_2 459..481 CDD:290200 9/21 (43%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 5/20 (25%)
COG5048 <258..416 CDD:227381 56/173 (32%)
C2H2 Zn finger 258..278 CDD:275368 3/22 (14%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
zf-H2C2_2 328..353 CDD:290200 10/24 (42%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
zf-H2C2_2 357..381 CDD:290200 10/23 (43%)
C2H2 Zn finger 372..392 CDD:275368 7/19 (37%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457882
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.980

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