DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and CG32772

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster


Alignment Length:288 Identity:70/288 - (24%)
Similarity:107/288 - (37%) Gaps:67/288 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 VPSKSVRASIHARNATKRRVNPRRSATSTASV---------------AVESSTSKTTD------- 302
            ||..|:...:..........|..:||.:.|:|               |..|||:.::|       
  Fly    17 VPGYSIPTCVRCSEQLTNNSNFHQSAAAAAAVAASASAAVAASAAAAATSSSTASSSDSDAIAQQ 81

  Fly   303 --RGNPLKVRRGNS----------DSAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKILLGDK 355
              ..||.:.:..||          .|:.|..:::|:.|....:::..:...              
  Fly    82 QQHQNPQQQQHQNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGS-------------- 132

  Fly   356 KEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSY 420
                  |.:|...:..:|.|..||:.||..:...|..|...|.||..|..|...||.:|||:|..
  Fly   133 ------CPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVD 191

  Fly   421 CPAAFADLSTRNKHHRIHTNERPYECD--VCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQ 483
            |...|..::..|.|.|:||.|||:.|:  .|.::|.....|..|...|...:.:.|:||.|.|.|
  Fly   192 CGKTFTQITNLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQ 256

  Fly   484 AYKLRNHRVIHERRGQSARESVAGLVSY 511
            ...|..|...|           ||:..|
  Fly   257 VTSLNQHLQAH-----------AGVTGY 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
zf-H2C2_2 375..399 CDD:290200 8/23 (35%)
COG5048 386..>447 CDD:227381 23/60 (38%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
zf-H2C2_2 403..426 CDD:290200 9/22 (41%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-H2C2_2 432..455 CDD:290200 11/24 (46%)
C2H2 Zn finger 446..466 CDD:275368 5/21 (24%)
zf-H2C2_2 459..481 CDD:290200 7/21 (33%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 49/181 (27%)
C2H2 Zn finger 133..153 CDD:275368 6/19 (32%)
zf-H2C2_2 145..170 CDD:290200 8/24 (33%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 173..198 CDD:290200 10/24 (42%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
C2H2 Zn finger 217..239 CDD:275368 5/21 (24%)
zf-H2C2_2 231..256 CDD:290200 8/24 (33%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..296 CDD:275368
C2H2 Zn finger 304..324 CDD:275368
C2H2 Zn finger 331..351 CDD:275368
C2H2 Zn finger 359..380 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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