DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and Zfp287

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001100478.1 Gene:Zfp287 / 303212 RGDID:1308617 Length:762 Species:Rattus norvegicus


Alignment Length:554 Identity:134/554 - (24%)
Similarity:206/554 - (37%) Gaps:169/554 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ETCQRSYGHLRQFVGPVEVEQRPPEKKGSETAT-KLEPDVD-PDEAEQEPEH-------DEEDED 139
            ||..::...|:.|          |:.|...|.| |||...| .|..|::|.:       ||:|..
  Rat   239 ETKAQACSPLKDF----------PKLKQDGTQTIKLEESCDCEDGLERQPAYAFRKIHIDEDDFS 293

  Fly   140 VDLDESHYAEADDAAE--TQGGVFHDEIEDG----ILVELEKDRIVHVKNE------QVEEDGII 192
            :   :|..::.|...|  ::..::.|..|..    |..:.:.|....:.||      .|...|::
  Rat   294 L---KSELSQEDPTEECLSKYDLYRDNFEKHTNLIIQFDTQSDSKTLLYNESKPTFTNVSSGGVV 355

  Fly   193 EEVYDVYETYEGDLIP-----------------------------DQGYDHEMADQALSELSAEI 228
                      .|.::|                             |:.|:.|...:....||:.|
  Rat   356 ----------HGKILPGDKPYSCNVCGKKFRKYPSLLAHRNNHAKDKSYECEECGKEFKHLSSLI 410

  Fly   229 EY------------------LDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIHARNAT 275
            .:                  ..|..|..:.:..|..:.....|...::|  |:....:||.|..|
  Rat   411 AHQRMHTGEKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYKCNDCGKDF--SQRAHLTIHQRTHT 473

  Fly   276 KRR-----------------VNPRRSATSTASVAVESSTSKTTDRGNPL----KVRRGNSD-SAG 318
            ..:                 :|.:|..|..... :.:...||..:...|    |:..|... ...
  Rat   474 GEKPYKCLECSKTFSHSSSLINHQRVHTGEKPY-ICNECGKTFSQSTHLLQHQKIHTGKKPYKCN 537

  Fly   319 SKMSIKSEKDISIGEVLARKHSGIK----TKGG----HKILL--------GDKKEFKYICDVCGN 367
            ....:.|:....|..  .|.|||.|    |:.|    |...|        |:|   .|||:|||.
  Rat   538 ECWKVFSQSTYLIRH--QRIHSGEKCYKCTECGKAFAHSSTLIQHQTTHTGEK---SYICNVCGK 597

  Fly   368 MYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHM-----------NT------------ 409
            .:...:.||:|.:.|:|.||::|.:||..|:|:..|.:|.           ||            
  Rat   598 AFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNTCGKAYRQGANLT 662

  Fly   410 -----HTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHTGE 469
                 |||.:||||.:|..||...|:.|:|.|.||.||||:|..|:|.|:....|..|:.|||||
  Rat   663 QHQRVHTGEKPYKCHHCGKAFIYSSSLNQHRRTHTGERPYKCTHCNKDFSQRTCLIQHQRIHTGE 727

  Fly   470 KPHVCDVCGKGFPQAYKLRNHRVIH----ERRGQ 499
            :|:.|.:|||.|.|:..|..|:.:|    .|.||
  Rat   728 RPYGCRICGKSFTQSTNLIQHQRVHMGARHRNGQ 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 3/10 (30%)
C2H2 Zn finger 362..382 CDD:275368 7/19 (37%)
zf-H2C2_2 375..399 CDD:290200 11/23 (48%)
COG5048 386..>447 CDD:227381 31/88 (35%)
C2H2 Zn finger 390..410 CDD:275368 9/47 (19%)
zf-H2C2_2 403..426 CDD:290200 13/50 (26%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
zf-H2C2_2 432..455 CDD:290200 13/22 (59%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
zf-H2C2_2 459..481 CDD:290200 12/21 (57%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
Zfp287NP_001100478.1 SCAN 46..133 CDD:280241
KRAB 168..225 CDD:214630
KRAB 168..207 CDD:279668
C2H2 Zn finger 368..388 CDD:275368 0/19 (0%)
zf-C2H2 394..416 CDD:278523 5/21 (24%)
C2H2 Zn finger 396..416 CDD:275368 4/19 (21%)
zf-H2C2_2 408..433 CDD:290200 1/24 (4%)
COG5048 420..752 CDD:227381 93/339 (27%)
C2H2 Zn finger 424..444 CDD:275368 2/19 (11%)
zf-H2C2_2 436..461 CDD:290200 4/26 (15%)
C2H2 Zn finger 452..472 CDD:275368 6/21 (29%)
zf-H2C2_2 464..489 CDD:290200 4/24 (17%)
C2H2 Zn finger 480..500 CDD:275368 2/19 (11%)
zf-H2C2_2 492..517 CDD:290200 5/25 (20%)
C2H2 Zn finger 508..528 CDD:275368 4/19 (21%)
zf-H2C2_2 520..545 CDD:290200 3/24 (13%)
C2H2 Zn finger 536..556 CDD:275368 3/21 (14%)
zf-H2C2_2 548..573 CDD:290200 8/26 (31%)
C2H2 Zn finger 564..584 CDD:275368 4/19 (21%)
zf-C2H2 590..612 CDD:278523 9/21 (43%)
C2H2 Zn finger 592..612 CDD:275368 7/19 (37%)
zf-H2C2_2 604..629 CDD:290200 11/24 (46%)
C2H2 Zn finger 620..640 CDD:275368 7/19 (37%)
zf-H2C2_2 632..657 CDD:290200 4/24 (17%)
C2H2 Zn finger 648..668 CDD:275368 2/19 (11%)
zf-H2C2_2 660..685 CDD:290200 10/24 (42%)
C2H2 Zn finger 676..696 CDD:275368 8/19 (42%)
zf-H2C2_2 688..713 CDD:290200 13/24 (54%)
C2H2 Zn finger 704..724 CDD:275368 6/19 (32%)
zf-H2C2_2 717..741 CDD:290200 13/23 (57%)
C2H2 Zn finger 732..752 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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