DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4936 and Zkscan17

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_766529.3 Gene:Zkscan17 / 268417 MGIID:2679270 Length:585 Species:Mus musculus


Alignment Length:531 Identity:108/531 - (20%)
Similarity:176/531 - (33%) Gaps:179/531 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 QFVGPVEVEQRPPEK-----KGSETATKLEPDVDPDEAEQEPEHDEEDEDVDLDESHYAEADDAA 154
            |.|..||..:|.|.:     |..|....:: |.|...|.|    |.|.|.:..:...|.:|...|
Mouse   112 QAVAAVEALEREPGRPWQWLKHCEDPVVID-DGDGPAAPQ----DLEQERMSAESQSYPDAPPGA 171

  Fly   155 ETQG--------GVFHDEI--EDGILV--------------ELEKDRIVHVKNEQV---EED--- 189
            ..||        |...:::  :|..:|              :|..:|:...|:..:   |||   
Mouse   172 LVQGTGLLSRSPGQPSEDLVPQDAFVVQEQSIRDAQPVATCQLPPNRVSPFKDMILCFSEEDWSL 236

  Fly   190 ------GIIEEVYDVYETYEGDLIPDQ-----GYDHE-------------MADQALSELSA---- 226
                  |...| :.:.|.|...:.|::     |:.||             :.|:.:.:.|.    
Mouse   237 LDPAQTGFYGE-FIIGEDYAVSMPPNEPPVQPGHSHEEENGLRVTEWTTDLQDKEIPQASCLDLS 300

  Fly   227 -------------------EIEYLDQVEHDQLTESAHED----DAEVDLNSTEEEFVPSKSVRAS 268
                               |::...||...|....|..|    .:.:|...|.|..:.|.....|
Mouse   301 SLQPFQGEERRKWEELQVPELQPCPQVVLSQSPCPAGGDPPALKSSLDQEVTIEIVLSSSGDEDS 365

  Fly   269 IHARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGE 333
            .|:...|:...:|.....|..  |.:|:.|                               :.||
Mouse   366 QHSPYCTEELRSPPEDLHSVP--AHQSNAS-------------------------------AEGE 397

  Fly   334 VLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFA 398
            |...:.|                   |:|..||.::..:.....|::.....|||:|.:||..|:
Mouse   398 VQTSQKS-------------------YVCPNCGKIFRWRVNFIRHLRSRREQKPHKCSVCGELFS 443

  Fly   399 QAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIH---TNERP----------------- 443
            .::.|..|:.||...:||:|:.|..:|...|....|.|||   .:::|                 
Mouse   444 DSEDLDGHLETHEAQKPYRCTACGKSFRLNSHLISHRRIHLQPASQQPMKKSEEEALETEGTGAS 508

  Fly   444 -----------YECDVCHKTFTYTNTLKFHKM---IHTGEKPHVCDVCGKGFPQAYKLRNHRVIH 494
                       ::|..|.|:|...:.|..|:.   :....:|..|..|.|.|.|.|.|..|..:|
Mouse   509 DLLEKSKAKLSFQCGDCEKSFQRHDHLVRHRRHCHLKDETRPFQCRYCVKTFRQNYDLLRHERLH 573

  Fly   495 -ERRGQSARES 504
             :||.:.|..|
Mouse   574 MKRRSKQALNS 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871 108/531 (20%)
C2H2 Zn finger 362..382 CDD:275368 4/19 (21%)
zf-H2C2_2 375..399 CDD:290200 8/23 (35%)
COG5048 386..>447 CDD:227381 22/91 (24%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 8/22 (36%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-H2C2_2 432..455 CDD:290200 9/53 (17%)
C2H2 Zn finger 446..466 CDD:275368 6/22 (27%)
zf-H2C2_2 459..481 CDD:290200 6/24 (25%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
Zkscan17NP_766529.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
SCAN 50..124 CDD:396558 5/11 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..167 8/30 (27%)
KRAB_A-box 221..>249 CDD:413388 6/28 (21%)
COG5048 <337..573 CDD:227381 59/287 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..397 9/71 (13%)
C2H2 Zn finger 407..427 CDD:275368 4/19 (21%)
C2H2 Zn finger 435..455 CDD:275368 6/19 (32%)
C2H2 Zn finger 463..483 CDD:275368 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..506 2/22 (9%)
C2H2 Zn finger 522..543 CDD:275368 6/20 (30%)
C2H2 Zn finger 553..573 CDD:275368 8/19 (42%)
Nuclear localization signal 575..579 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I4340
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.