DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and Zscan22

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001001447.1 Gene:Zscan22 / 232878 MGIID:2443312 Length:496 Species:Mus musculus


Alignment Length:459 Identity:115/459 - (25%)
Similarity:166/459 - (36%) Gaps:177/459 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 LRQFVGPVEVEQRPPE----------KKGSETA------TKL------EPDVDPDEAEQEPEHDE 135
            |.||:|.:     |||          |.|.|.|      |:|      ||.|:.:||..:..:.:
Mouse    94 LEQFLGAL-----PPEIQAWVGAQCPKSGKEAAVLVEDMTQLLDRRGWEPGVEREEASCKQSNTD 153

  Fly   136 EDEDVDLDESHYAEADDAAETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYE 200
                                                |||..::                   ..|
Mouse   154 ------------------------------------ELEPPKM-------------------ATE 163

  Fly   201 TYEGDLIPDQGYDHEMADQALSELSAEIEYL--------------------------DQVEHDQL 239
            |..|.::|.....|....::.||  ::.|:|                          ||..|:..
Mouse   164 TVMGSVLPKSTLAHTCKPESHSE--SQPEFLGALWMKSTAQEMDFRKALGPHMDAPKDQPGHESN 226

  Fly   240 TES---------AHEDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVES 295
            |..         ..:|.|     |:||:|.|...        |.|   |.|     .|.|   |.
Mouse   227 TSGNGSNMWPNFPSQDKA-----SSEEKFGPLLD--------NET---VPP-----DTCS---EK 267

  Fly   296 STSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKY 360
            .:||.::                   .:|:.::.|..|...:.||               ::..|
Mouse   268 KSSKDSE-------------------CLKTFQNTSALEAHQKSHS---------------QKTPY 298

  Fly   361 ICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAF 425
            .|..||.::...:.|.:|..||:|.|||.|:.||..|::...|.:|:..|||.:||||..|...|
Mouse   299 ACTECGKVFSRSTHLVQHQVVHTGAKPHACKECGKAFSRVAHLTQHLRIHTGEKPYKCEECGKTF 363

  Fly   426 ADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNH 490
            :..:...:|.|:||.|||||||.|.|.|:.:..|..|:.|||||||:.||||||.|.....|..|
Mouse   364 SRSTHLTQHQRVHTGERPYECDTCGKAFSQSTHLTQHQRIHTGEKPYRCDVCGKAFSDCSALVRH 428

  Fly   491 RVIH 494
            ..:|
Mouse   429 LRVH 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871 1/1 (100%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
COG5048 386..>447 CDD:227381 27/60 (45%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
SFP1 <424..491 CDD:227516 32/66 (48%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..494 CDD:275368 9/19 (47%)
Zscan22NP_001001447.1 SCAN 45..129 CDD:460417 11/39 (28%)
COG5048 <181..479 CDD:227381 89/312 (29%)
C2H2 Zn finger 273..292 CDD:275368 3/37 (8%)
C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
C2H2 Zn finger 328..348 CDD:275368 6/19 (32%)
C2H2 Zn finger 356..376 CDD:275368 5/19 (26%)
C2H2 Zn finger 384..404 CDD:275368 7/19 (37%)
C2H2 Zn finger 412..432 CDD:275368 9/19 (47%)
C2H2 Zn finger 440..460 CDD:275368
C2H2 Zn finger 468..488 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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