DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and Zfp13

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_011244722.1 Gene:Zfp13 / 22654 MGIID:99159 Length:546 Species:Mus musculus


Alignment Length:264 Identity:82/264 - (31%)
Similarity:114/264 - (43%) Gaps:38/264 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 DAEVDLNSTEEEFVP-----SKSVRA-------SIHARNATKRRVNPRRSATSTASVAVESSTSK 299
            :.|..|.|.||..||     .|:.:.       |.|:...|.||.:......:            
Mouse   277 EGEEALKSGEEGLVPDGDTGKKTYKCEQCGKGFSWHSHLVTHRRTHTGEKPYT------------ 329

  Fly   300 TTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKILLGDKK----EFKY 360
            .||.|.    |.|.|.      .:...:.|..||......|..|:...|..|:..::    |..|
Mouse   330 CTDCGK----RFGRSS------HLIQHQIIHTGEKPYTCPSCWKSFSHHSTLIQHQRIHTGEKPY 384

  Fly   361 ICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAF 425
            :||.|...:..:|.|..|...|:|.|||:|.||..||.|:..|..|..||||.:||.|..|...|
Mouse   385 VCDRCAKRFTRRSDLVTHQGTHTGAKPHKCPICSKCFTQSSALVTHQRTHTGVKPYPCPECGKCF 449

  Fly   426 ADLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNH 490
            :..|....|:|.||.|:||.|..|.|:|::::.|..|:..|.|.:|:.|.:|||.|.:...|..|
Mouse   450 SQRSNLIAHNRTHTGEKPYHCLDCGKSFSHSSHLTAHQRTHRGVRPYSCPLCGKSFSRRSNLHRH 514

  Fly   491 RVIH 494
            ..||
Mouse   515 EKIH 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
zf-H2C2_2 375..399 CDD:290200 12/23 (52%)
COG5048 386..>447 CDD:227381 28/60 (47%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
zf-H2C2_2 403..426 CDD:290200 10/22 (45%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-H2C2_2 432..455 CDD:290200 11/22 (50%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
zf-H2C2_2 459..481 CDD:290200 9/21 (43%)
C2H2 Zn finger 474..494 CDD:275368 7/19 (37%)
Zfp13XP_011244722.1 KRAB 124..179 CDD:214630
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
zf-H2C2_2 314..339 CDD:372612 7/40 (18%)
C2H2 Zn finger 330..350 CDD:275368 6/29 (21%)
zf-H2C2_2 342..367 CDD:372612 5/24 (21%)
C2H2 Zn finger 358..378 CDD:275368 4/19 (21%)
COG5048 <360..520 CDD:227381 60/159 (38%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
C2H2 Zn finger 442..462 CDD:275368 6/19 (32%)
C2H2 Zn finger 470..490 CDD:275368 6/19 (32%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I4340
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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