DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4936 and ZNF485

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001305069.1 Gene:ZNF485 / 220992 HGNCID:23440 Length:441 Species:Homo sapiens


Alignment Length:176 Identity:70/176 - (39%)
Similarity:94/176 - (53%) Gaps:19/176 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 RKHSGIK----TKGG------------HKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGV 385
            |.|||.|    .|.|            .||..|:|   .|.|:.||..:...|.|..|.::|:|.
Human   262 RIHSGEKPFKCNKCGRAFRDNSTVLEHQKIHTGEK---PYQCNECGKAFRKSSTLISHQRMHTGE 323

  Fly   386 KPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCH 450
            ||:.|..||..|..:...|.|..||:||:||:|..|..||...||...|.||||.|:||.|..|.
Human   324 KPYHCSKCGKSFRYSSSFAGHQKTHSGNKPYQCRDCGKAFTKSSTLTGHQRIHTGEKPYHCKKCG 388

  Fly   451 KTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIHER 496
            |.|.:::.|..|:.:||||||:.|:.|||.||::..|:.|:.||.:
Human   389 KAFRHSSGLVEHQRLHTGEKPYKCNECGKAFPRSSALKQHKKIHNK 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
zf-H2C2_2 375..399 CDD:290200 10/23 (43%)
COG5048 386..>447 CDD:227381 28/60 (47%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
zf-H2C2_2 403..426 CDD:290200 11/22 (50%)
C2H2 Zn finger 418..438 CDD:275368 8/19 (42%)
zf-H2C2_2 432..455 CDD:290200 12/22 (55%)
C2H2 Zn finger 446..466 CDD:275368 6/19 (32%)
zf-H2C2_2 459..481 CDD:290200 12/21 (57%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
ZNF485NP_001305069.1 KRAB 11..71 CDD:214630
KRAB 11..50 CDD:279668
COG5048 <124..361 CDD:227381 36/101 (36%)
C2H2 Zn finger 132..152 CDD:275368
C2H2 Zn finger 160..180 CDD:275368
C2H2 Zn finger 188..208 CDD:275368
C2H2 Zn finger 216..236 CDD:275368
zf-H2C2_2 229..253 CDD:290200
C2H2 Zn finger 244..264 CDD:275368 1/1 (100%)
zf-H2C2_2 256..279 CDD:290200 7/16 (44%)
C2H2 Zn finger 272..292 CDD:275368 3/19 (16%)
zf-H2C2_2 287..307 CDD:290200 8/22 (36%)
C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
zf-H2C2_2 313..337 CDD:290200 10/23 (43%)
C2H2 Zn finger 328..348 CDD:275368 6/19 (32%)
C2H2 Zn finger 356..376 CDD:275368 8/19 (42%)
zf-H2C2_2 372..393 CDD:290200 12/20 (60%)
C2H2 Zn finger 384..404 CDD:275368 6/19 (32%)
zf-H2C2_2 397..419 CDD:290200 12/21 (57%)
C2H2 Zn finger 412..432 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.