DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and unc-98

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_509284.2 Gene:unc-98 / 181020 WormBaseID:WBGene00006827 Length:310 Species:Caenorhabditis elegans


Alignment Length:306 Identity:61/306 - (19%)
Similarity:104/306 - (33%) Gaps:103/306 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 VEHDQLTESAHE-DDAEVDLNSTEEEFVPSKSVRAS--IH-----------ARNATKRRVNPR-- 282
            ::.|...|:..| ||.|..:|:.:   :...||:.:  :|           :.|..|.:  |:  
 Worm     1 MDDDIFKEARKERDDFEELMNACD---LAKMSVKNNEMVHGLETFGINGESSENGNKEK--PKEI 60

  Fly   283 -RSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSIKSEKDISIGEVLARKHSGIKTKG 346
             :....|....|.||:::|     |.|       |:|..:....::::              .:.
 Worm    61 MKVVAPTVEAYVGSSSAQT-----PTK-------SSGGALDGSDQQEV--------------RQD 99

  Fly   347 GHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHT 411
            |..:...|.....|.|..||..:...:.|..|.::|...:|:.|..||..|..|.||..|...|:
 Worm   100 GTSVQKDDNGFVFYKCRFCGLTFNFMNTLRAHERIHDVSQPYVCGKCGDSFEFACQLEYHAAQHS 164

  Fly   412 GNRPYKCSYCPAAFADLSTRNKHHRIHTNE----------------------------------- 441
            ....|||. |...|... |...:|: ||::                                   
 Worm   165 EIDGYKCE-CGRTFFSY-TEMLYHK-HTDDPLELIGAPETTTIKVSKKRVLPVSEQDLPQPAFVT 226

  Fly   442 -----------------RPYECDVCHKTFTYTNTLKFHKMIHTGEK 470
                             :||.|:.|.|:::.:..|.:|...|.|||
 Worm   227 EGYEPKHPLRVYNDVRSKPYICEYCSKSYSDSRGLAYHMYSHRGEK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
zf-H2C2_2 375..399 CDD:290200 8/23 (35%)
COG5048 386..>447 CDD:227381 21/112 (19%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
zf-H2C2_2 403..426 CDD:290200 7/22 (32%)
C2H2 Zn finger 418..438 CDD:275368 5/19 (26%)
zf-H2C2_2 432..455 CDD:290200 8/74 (11%)
C2H2 Zn finger 446..466 CDD:275368 5/19 (26%)
zf-H2C2_2 459..481 CDD:290200 6/12 (50%)
C2H2 Zn finger 474..494 CDD:275368
unc-98NP_509284.2 C2H2 Zn finger 115..135 CDD:275368 5/19 (26%)
C2H2 Zn finger 143..163 CDD:275368 8/19 (42%)
SFP1 <169..268 CDD:227516 16/101 (16%)
C2H2 Zn finger 171..189 CDD:275368 5/20 (25%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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