DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4936 and hinf-1

DIOPT Version :9

Sequence 1:NP_650862.1 Gene:CG4936 / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_493579.2 Gene:hinf-1 / 173348 WormBaseID:WBGene00009553 Length:541 Species:Caenorhabditis elegans


Alignment Length:399 Identity:87/399 - (21%)
Similarity:138/399 - (34%) Gaps:97/399 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 EDEDVDLDESHYAEADDAAETQGGVFHDEIE----------DGILVELEKDRIVHVKNEQVEEDG 190
            :||.||....|.:..::.  .|.|...:.::          |.|. :|.:...:||.....::.|
 Worm   153 KDEFVDHLFGHVSVIEEG--VQNGNHMNTVQCKVRGCNKHLDSIF-QLHRHVSMHVFQADCQQKG 214

  Fly   191 ----IIEEVYDVYET----------YEGDLIPDQGYDHEMADQALSELSAEIEYLDQVEHDQLTE 241
                |.:|.|...|:          |||.|:..|..|..|...:|:||      .|.|       
 Worm   215 SEALIEKEDYIGIESCGFEPCTNINYEGMLLNCQWEDCGMPFNSLTEL------FDHV------- 266

  Fly   242 SAHEDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNP 306
             .|..|...|::..::.|            .|..|:.|.|   ...||...|..|.:        
 Worm   267 -GHHIDGVGDVDRIQQNF------------SNGDKKVVFP---CKWTACTQVADSKA-------- 307

  Fly   307 LKVRRGNSDSAGSKM-------SIKSEKDISIGEVLARKHSGIKTKGGHKILL-GDKKEFKYICD 363
             .:||.....:|.|:       ...|.:|......|.|           .||: ..:.|..|:|.
 Worm   308 -NLRRHARHHSGEKVLACPFCARFFSRRDKLYDHCLRR-----------TILMKNPEMEDPYLCK 360

  Fly   364 VCGNMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNR--PYKCSYCPAAFA 426
            :|...:.::..|..|:..|  :....|.:|........:|.||:.|....|  .:||..|...|.
 Worm   361 LCQKRFGTEKALCMHVTRH--LVSLTCPLCSLGLGCRAELHRHLMTKHSRRSKDFKCDTCSKLFF 423

  Fly   427 DLSTRNKHHRIHTNERPYECDVCHKTFTYTNTLKFHKMIHT---GEKPHVCDVCGKGFPQAYKL- 487
            ..|..|:|...|::.. |.|..|.:.|.:...|..|...|.   ...|:.|.:|.:.:...:.| 
 Worm   424 TESELNRHAVYHSDVM-YSCKHCPEKFKWKKQLMKHMKEHDENFNPSPYTCHLCDRTYTTGFALG 487

  Fly   488 ----RNHRV 492
                |.||:
 Worm   488 RHLTRQHRL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4936NP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 4/19 (21%)
zf-H2C2_2 375..399 CDD:290200 5/23 (22%)
COG5048 386..>447 CDD:227381 16/62 (26%)
C2H2 Zn finger 390..410 CDD:275368 5/19 (26%)
zf-H2C2_2 403..426 CDD:290200 8/24 (33%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
zf-H2C2_2 432..455 CDD:290200 7/22 (32%)
C2H2 Zn finger 446..466 CDD:275368 5/19 (26%)
zf-H2C2_2 459..481 CDD:290200 6/24 (25%)
C2H2 Zn finger 474..494 CDD:275368 6/24 (25%)
hinf-1NP_493579.2 C2H2 Zn finger 299..316 CDD:275368 4/25 (16%)
C2H2 Zn finger 324..344 CDD:275368 3/19 (16%)
C2H2 Zn finger 359..379 CDD:275368 4/19 (21%)
C2H2 Zn finger 385..406 CDD:275368 6/20 (30%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 442..462 CDD:275368 5/19 (26%)
C2H2 Zn finger 473..494 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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