DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and ZNF578

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001093164.1 Gene:ZNF578 / 147660 HGNCID:26449 Length:590 Species:Homo sapiens


Alignment Length:429 Identity:113/429 - (26%)
Similarity:180/429 - (41%) Gaps:76/429 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 EQRPPEKKGSETATKL--------EPDVDPDEAEQE---PEHDEEDEDVDLDESHYAEADDAAET 156
            |:...::||.|....|        :..::...||.:   |.......:|.|:.....||.|.:..
Human     4 EEAAQKRKGKEPGMALPQGRLTFRDVAIEFSLAEWKFLNPAQRALYREVMLENYRNLEAVDISSK 68

  Fly   157 ----------QGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEGDLIPDQG 211
                      ||..  :.|..|:|...|.........:::|:|     ::|    :|.....|:.
Human    69 RMMKEVLSTGQGNT--EVIHTGMLQRHESYHTGDFCFQEIEKD-----IHD----FEFQSQKDER 122

  Fly   212 YDHEMADQALSELSAEIEYLDQVEH-------DQLTESAHEDDAEVDLNSTEEEFVPSKSVRASI 269
            ..||.:...:.||....:..|| .|       |||..|.|....|:.:...||:..         
Human   123 NGHEASMPKIKELMGSTDRHDQ-RHAGNKPIKDQLGLSFHLHLPELHIFQPEEKIA--------- 177

  Fly   270 HARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKMSI-KSEKDISIGE 333
               |..::.||...|.:::..::....|....:.||..    .:|.....|..: ..||.....|
Human   178 ---NQVEKSVNDASSISTSQRISCRPETHTPNNYGNNF----FHSSLLTQKQEVHMREKSFQCNE 235

  Fly   334 V--------LARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHEC 390
            .        ..|||..|.        ||: |::|:  |:||.::..:..|..|.:.|:..||::|
Human   236 TGEAFNCSSFVRKHQIIH--------LGE-KQYKF--DICGKVFNEKRYLARHRRCHTSEKPYKC 289

  Fly   391 EICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYECDVCHKTFTY 455
            ..||..|:....|..|...|||.:||||:.|..:|:..|:...|||.||.|:||:|:.|.|:|:|
Human   290 NECGKSFSYKSSLTCHRRCHTGEKPYKCNECGKSFSYKSSLTCHHRCHTGEKPYKCNECGKSFSY 354

  Fly   456 TNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIH 494
            .::|:.|:.:|||.||:.|:.|||.|.|...|..|:.||
Human   355 KSSLRCHRRLHTGIKPYKCNECGKMFGQNSTLVIHKAIH 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
COG5048 386..>447 CDD:227381 26/60 (43%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
SFP1 <424..491 CDD:227516 29/66 (44%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..494 CDD:275368 8/19 (42%)
ZNF578NP_001093164.1 KRAB 24..60 CDD:460171 5/35 (14%)
C2H2 Zn finger 233..253 CDD:275368 4/19 (21%)
COG5048 257..>582 CDD:227381 56/139 (40%)
C2H2 Zn finger 262..281 CDD:275368 5/18 (28%)
C2H2 Zn finger 289..309 CDD:275368 6/19 (32%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..393 CDD:275368 8/19 (42%)
C2H2 Zn finger 401..421 CDD:275368
C2H2 Zn finger 429..449 CDD:275368
C2H2 Zn finger 457..477 CDD:275368
C2H2 Zn finger 485..505 CDD:275368
C2H2 Zn finger 513..533 CDD:275368
C2H2 Zn finger 541..561 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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