DRSC/TRiP Functional Genomics Resources

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Protein Alignment idc and znf184

DIOPT Version :10

Sequence 1:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001165000.1 Gene:znf184 / 100327247 XenbaseID:XB-GENE-5794876 Length:587 Species:Xenopus tropicalis


Alignment Length:250 Identity:72/250 - (28%)
Similarity:100/250 - (40%) Gaps:79/250 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 GSKMSIKSEKDISIGEVLARKHSGIKT-------KG--------GH-KILLGDKKEFKYICDVCG 366
            |..:|..|...|.:     :.|:|:|.       ||        .| |:..|   |..:.|..||
 Frog   337 GKTLSSSSSLHIHL-----KTHTGVKPFTCTECGKGFTQKNRLESHMKLHTG---ENPFTCTECG 393

  Fly   367 NMYPSQSRLTEHIKVHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLST- 430
            ..:..:..|..|:|:|:|.||..|..||..|.:.:.|..|:|.|||.:|:.||.|...||..|: 
 Frog   394 KCFTQKCYLKSHMKIHTGEKPFTCTECGKQFTRKESLLGHLNLHTGVKPFTCSECGKGFAKRSSL 458

  Fly   431 -------------------------------------------------RNKHH-----RIHTNE 441
                                                             |:|.|     :.||.|
 Frog   459 VSHMKLHTEEKNFSCTECGKKFVQKAGLVYHLKIHTGEKLFCTECGKGVRSKSHLASHMKKHTGE 523

  Fly   442 RPYECDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIHER 496
            :||.|..|.|:|...|.|..|..|||||||..|..|||||.:|..|:.|:.:|::
 Frog   524 KPYTCSECGKSFAQRNNLVSHMKIHTGEKPFTCTECGKGFAKAVGLQKHKCVHQK 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
idcNP_650862.1 zf-AD 22..95 CDD:214871
C2H2 Zn finger 362..382 CDD:275368 6/19 (32%)
COG5048 386..>447 CDD:227381 27/115 (23%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 418..438 CDD:275368 9/74 (12%)
SFP1 <424..491 CDD:227516 33/121 (27%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
C2H2 Zn finger 474..494 CDD:275368 9/19 (47%)
znf184NP_001165000.1 C2H2 Zn finger 27..46 CDD:275368
C2H2 Zn finger 54..74 CDD:275368
C2H2 Zn finger 82..102 CDD:275368
C2H2 Zn finger 110..130 CDD:275368
COG5048 138..544 CDD:227381 54/214 (25%)
C2H2 Zn finger 138..158 CDD:275368
C2H2 Zn finger 166..186 CDD:275368
C2H2 Zn finger 194..214 CDD:275368
C2H2 Zn finger 222..242 CDD:275368
C2H2 Zn finger 250..270 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 305..325 CDD:275368
C2H2 Zn finger 333..353 CDD:275368 4/20 (20%)
C2H2 Zn finger 361..381 CDD:275368 4/19 (21%)
C2H2 Zn finger 389..409 CDD:275368 6/19 (32%)
C2H2 Zn finger 417..437 CDD:275368 7/19 (37%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 473..493 CDD:275368 0/19 (0%)
C2H2 Zn finger 500..520 CDD:275368 3/19 (16%)
C2H2 Zn finger 528..548 CDD:275368 7/19 (37%)
zf-H2C2_2 540..565 CDD:463886 15/24 (63%)
C2H2 Zn finger 556..576 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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