DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trem and ZNF845

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001308451.1 Gene:ZNF845 / 91664 HGNCID:25112 Length:970 Species:Homo sapiens


Alignment Length:200 Identity:70/200 - (35%)
Similarity:98/200 - (49%) Gaps:27/200 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 THAKPEKCDRSGR-----KPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTE 289
            |..|..||:..|:     ..:.||:        :...|.||      |.|:.|...:..::.|..
Human   322 TGEKSYKCNECGKTFSQTSYLVYHR--------RLHTGEKP------YKCEECDKAFSFKSNLER 372

  Fly   290 HMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKER 354
            |.|.|:|.||::|..|.|.|.:...|.||...|||.:|||||.|...|:..|:...|.|:||.|:
Human   373 HRKIHTGEKPYKCNECSRTFSRKSSLTRHRRLHTGEKPYKCNDCGKTFSQMSSLVYHRRLHTGEK 437

  Fly   355 PYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEES 419
            ||.|:.|...|::..||:.|:.|||||||:.|:.|||.|.:...|..||..|.        .|:.
Human   438 PYKCEECDEAFSFKSNLERHRRIHTGEKPYKCNDCGKTFSQTSSLVYHRRLHT--------GEKP 494

  Fly   420 TKAED 424
            .|.|:
Human   495 YKCEE 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 59/146 (40%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
zf-H2C2_2 315..338 CDD:290200 12/22 (55%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 345..367 CDD:290200 10/21 (48%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
zf-H2C2_2 370..394 CDD:290200 14/23 (61%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
ZNF845NP_001308451.1 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
COG5048 169..564 CDD:227381 70/199 (35%)
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 329..349 CDD:275368 4/27 (15%)
C2H2 Zn finger 357..377 CDD:275368 5/19 (26%)
zf-H2C2_2 369..394 CDD:290200 11/24 (46%)
COG5048 381..813 CDD:227381 52/126 (41%)
C2H2 Zn finger 385..405 CDD:275368 7/19 (37%)
zf-H2C2_2 397..422 CDD:290200 13/24 (54%)
C2H2 Zn finger 413..433 CDD:275368 7/19 (37%)
C2H2 Zn finger 441..461 CDD:275368 6/19 (32%)
zf-H2C2_2 453..478 CDD:290200 15/24 (63%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..517 CDD:275368 1/2 (50%)
zf-H2C2_2 509..534 CDD:290200
C2H2 Zn finger 525..545 CDD:275368
zf-H2C2_2 537..560 CDD:290200
C2H2 Zn finger 553..573 CDD:275368
C2H2 Zn finger 581..601 CDD:275368
C2H2 Zn finger 609..629 CDD:275368
C2H2 Zn finger 637..657 CDD:275368
zf-H2C2_2 649..674 CDD:290200
C2H2 Zn finger 665..685 CDD:275368
C2H2 Zn finger 693..713 CDD:275368
C2H2 Zn finger 721..741 CDD:275368
C2H2 Zn finger 749..769 CDD:275368
zf-H2C2_2 761..786 CDD:290200
C2H2 Zn finger 777..797 CDD:275368
C2H2 Zn finger 805..825 CDD:275368
C2H2 Zn finger 833..853 CDD:275368
zf-H2C2_2 845..870 CDD:290200
C2H2 Zn finger 861..881 CDD:275368
zf-H2C2_2 873..898 CDD:290200
C2H2 Zn finger 889..909 CDD:275368
C2H2 Zn finger 917..937 CDD:275368
C2H2 Zn finger 945..965 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.