DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZNF160

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001096073.1 Gene:ZNF160 / 90338 HGNCID:12948 Length:818 Species:Homo sapiens


Alignment Length:485 Identity:125/485 - (25%)
Similarity:179/485 - (36%) Gaps:121/485 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SNEKWVVCRVCLNNPSEGEELLHDIFSETASTRLD-QMLHICAGIPVSLDDNFPDKMCSKCVRCL 68
            |.|:|    .|| :|:: ..|..|:..|.....:. .:.|....|...|::.........||:..
Human    18 SQEEW----KCL-DPAQ-RILYRDVMLENYWNLVSLGLCHFDMNIISMLEEGKEPWTVKSCVKIA 76

  Fly    69 RL-----CYKFRLTCQRSHQHIMDMLDREASNANAAGEGDLLS-----IAEDLSVESVLKS---- 119
            |.     |.|..:|.......|.|:|.:|.|:..|.....:|.     ..||.|.:...|:    
Human    77 RKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLERHESPDIEDFSFKEPQKNVHDF 141

  Fly   120 ---WEDYASQLDGGM--KVEGEEDQ-----------------------------QHQVITYVVED 150
               |.|......|.:  :.||:.||                             |.:...|....
Human   142 ECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQLGVSFHSHLPELQLFQGEGKMYECNQ 206

  Fly   151 GDTDDTNMFDVHDPTQPVPNEIE--EAETYAEYEEYELLTNENSPEIAQEKGSTGTDVATEEPPE 213
            .:....|...| .|.|.:|:.::  .::.|.|...:.|||..      ::..|.|          
Human   207 VEKSTNNGSSV-SPLQQIPSSVQTHRSKKYHELNHFSLLTQR------RKANSCG---------- 254

  Fly   214 EEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCG 278
                               ||.||:..|:   |:.:||......:...|.||      |.|..||
Human   255 -------------------KPYKCNECGK---AFTQNSNLTSHRRIHSGEKP------YKCSECG 291

  Fly   279 NIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTK 343
            ..:..::.||.|...|:|.||::|..||:.|..|..|..|...|||.:|||||.|..||...|..
Human   292 KTFTVRSNLTIHQVIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGEKPYKCNECGKAFRGHSNL 356

  Fly   344 TKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNR 408
            |.|..|||.|:|:.|:.|.:.||.:.:|..|..|||||||:.|:.|||.|.....|.:|:..|. 
Human   357 TTHQLIHTGEKPFKCNECGKLFTQNSHLISHWRIHTGEKPYKCNECGKAFSVRSSLAIHQTIHT- 420

  Fly   409 RITWRNDAEESTKAEDVKGETPEFLNELPK 438
                              ||.|...||..|
Human   421 ------------------GEKPYKCNECGK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871 16/81 (20%)
COG5048 <264..411 CDD:227381 60/146 (41%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
zf-H2C2_2 315..338 CDD:290200 12/22 (55%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
zf-H2C2_2 345..367 CDD:290200 9/21 (43%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
zf-H2C2_2 370..394 CDD:290200 13/23 (57%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZNF160NP_001096073.1 KRAB 8..68 CDD:214630 12/55 (22%)
KRAB 8..47 CDD:279668 9/34 (26%)
zf-C2H2 257..279 CDD:278523 6/24 (25%)
C2H2 Zn finger 259..279 CDD:275368 5/22 (23%)
zf-H2C2_2 271..295 CDD:290200 7/29 (24%)
C2H2 Zn finger 287..307 CDD:275368 6/19 (32%)
zf-H2C2_2 299..324 CDD:290200 11/24 (46%)
C2H2 Zn finger 315..335 CDD:275368 7/19 (37%)
zf-H2C2_2 327..350 CDD:290200 11/22 (50%)
C2H2 Zn finger 343..363 CDD:275368 8/19 (42%)
zf-H2C2_2 355..380 CDD:290200 10/24 (42%)
COG5048 367..810 CDD:227381 28/85 (33%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
zf-H2C2_2 411..436 CDD:290200 9/41 (22%)
C2H2 Zn finger 427..447 CDD:275368 3/6 (50%)
zf-H2C2_2 439..463 CDD:290200
C2H2 Zn finger 455..475 CDD:275368
C2H2 Zn finger 483..503 CDD:275368
zf-H2C2_2 496..519 CDD:290200
C2H2 Zn finger 511..531 CDD:275368
zf-H2C2_2 523..548 CDD:290200
C2H2 Zn finger 539..559 CDD:275368
zf-H2C2_2 551..576 CDD:290200
C2H2 Zn finger 567..587 CDD:275368
C2H2 Zn finger 595..615 CDD:275368
zf-H2C2_2 607..632 CDD:290200
C2H2 Zn finger 623..643 CDD:275368
zf-H2C2_2 635..659 CDD:290200
C2H2 Zn finger 651..671 CDD:275368
zf-H2C2_2 663..688 CDD:290200
C2H2 Zn finger 679..699 CDD:275368
zf-H2C2_2 691..715 CDD:290200
C2H2 Zn finger 707..727 CDD:275368
zf-H2C2_2 719..744 CDD:290200
C2H2 Zn finger 735..755 CDD:275368
zf-H2C2_2 747..770 CDD:290200
C2H2 Zn finger 763..783 CDD:275368
zf-H2C2_2 775..800 CDD:290200
C2H2 Zn finger 791..811 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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