Sequence 1: | NP_650861.1 | Gene: | trem / 42392 | FlyBaseID: | FBgn0038767 | Length: | 439 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016882932.1 | Gene: | ZNF468 / 90333 | HGNCID: | 33105 | Length: | 541 | Species: | Homo sapiens |
Alignment Length: | 218 | Identity: | 71/218 - (32%) |
---|---|---|---|
Similarity: | 104/218 - (47%) | Gaps: | 18/218 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 230 THAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFH 294
Fly 295 SGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCD 359
Fly 360 VCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWR---------ND 415
Fly 416 AEESTKAEDVKGETPEFLNELPK 438 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trem | NP_650861.1 | zf-AD | 11..87 | CDD:214871 | |
COG5048 | <264..411 | CDD:227381 | 55/146 (38%) | ||
C2H2 Zn finger | 274..294 | CDD:275368 | 4/19 (21%) | ||
zf-H2C2_2 | 287..311 | CDD:290200 | 9/23 (39%) | ||
C2H2 Zn finger | 302..322 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 315..338 | CDD:290200 | 10/22 (45%) | ||
C2H2 Zn finger | 330..350 | CDD:275368 | 9/19 (47%) | ||
zf-H2C2_2 | 345..367 | CDD:290200 | 11/21 (52%) | ||
C2H2 Zn finger | 358..378 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 370..394 | CDD:290200 | 11/23 (48%) | ||
C2H2 Zn finger | 386..406 | CDD:275368 | 7/19 (37%) | ||
ZNF468 | XP_016882932.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |