DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZNF527

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_115829.1 Gene:ZNF527 / 84503 HGNCID:29385 Length:609 Species:Homo sapiens


Alignment Length:294 Identity:81/294 - (27%)
Similarity:130/294 - (44%) Gaps:44/294 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 GEEDQQHQVITYVVED-GDTDDTNMFDVHDPTQ-----------------PVPNEIEEA----ET 177
            |.|.::....||:.:| |.......::.||.::                 .:|:..:|.    ..
Human   221 GNECEEFNQSTYLSKDIGIPPGEKPYESHDFSKLLSFHSLFTQHQTTHFGKLPHGYDECGDAFSC 285

  Fly   178 YAEYEEYELLTNENSPEIAQEKGSTGTDVATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGR 242
            |:.:.:.:.:.:...|....:.|             :..:.|...|:........||.:|....:
Human   286 YSFFTQPQRIHSGEKPYACNDCG-------------KAFSHDFFLSEHQRTHIGEKPYECKECNK 337

  Fly   243 KPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGR 307
               |:.:::...:..:...|.||      :.|:.||..:...|.|.||.:.|:|.||:||:.|.:
Human   338 ---AFRQSAHLAQHQRIHTGEKP------FACNECGKAFSRYAFLVEHQRIHTGEKPYECKECNK 393

  Fly   308 GFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLK 372
            .|.|:..|.:|...|||.:||:||.|..||:.|...|.|.||||.|:|:.|..|.:||.|..:|.
Human   394 AFRQSAHLNQHQRIHTGEKPYECNQCGKAFSRRIALTLHQRIHTGEKPFKCSECGKTFGYRSHLN 458

  Fly   373 FHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETH 406
            .|:.|||||||:.|..|||.|....:|..|...|
Human   459 QHQRIHTGEKPYECIKCGKFFRTDSQLNRHHRIH 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 61/143 (43%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
zf-H2C2_2 315..338 CDD:290200 11/22 (50%)
C2H2 Zn finger 330..350 CDD:275368 9/19 (47%)
zf-H2C2_2 345..367 CDD:290200 11/21 (52%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
zf-H2C2_2 370..394 CDD:290200 13/23 (57%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZNF527NP_115829.1 KRAB 14..53 CDD:279668
C2H2 Zn finger 222..240 CDD:275368 5/17 (29%)
C2H2 Zn finger 252..268 CDD:275368 0/15 (0%)
C2H2 Zn finger 277..296 CDD:275368 2/18 (11%)
C2H2 Zn finger 304..324 CDD:275368 3/32 (9%)
zf-H2C2_2 317..341 CDD:290200 5/26 (19%)
COG5048 <328..490 CDD:227381 65/170 (38%)
C2H2 Zn finger 332..352 CDD:275368 2/22 (9%)
zf-H2C2_2 344..369 CDD:290200 6/30 (20%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
zf-H2C2_2 373..397 CDD:290200 11/23 (48%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
zf-H2C2_2 400..425 CDD:290200 12/24 (50%)
C2H2 Zn finger 416..436 CDD:275368 9/19 (47%)
zf-H2C2_2 428..453 CDD:290200 12/24 (50%)
C2H2 Zn finger 444..464 CDD:275368 7/19 (37%)
zf-H2C2_2 456..481 CDD:290200 14/24 (58%)
C2H2 Zn finger 472..492 CDD:275368 7/19 (37%)
zf-H2C2_2 485..508 CDD:290200 3/8 (38%)
C2H2 Zn finger 500..520 CDD:275368
zf-H2C2_2 516..537 CDD:290200
C2H2 Zn finger 528..548 CDD:275368
zf-H2C2_2 540..565 CDD:290200
C2H2 Zn finger 556..576 CDD:275368
zf-H2C2_2 568..593 CDD:290200
C2H2 Zn finger 584..604 CDD:275368
KRAB 14..74 CDD:214630
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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