DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trem and DOT5

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_172787.1 Gene:DOT5 / 837889 AraportID:AT1G13290 Length:302 Species:Arabidopsis thaliana


Alignment Length:313 Identity:63/313 - (20%)
Similarity:100/313 - (31%) Gaps:93/313 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 GDTDDTNMFDVHDPTQPVP--NEIEEAETYAEYEEYELLTNENSPEIAQEKGSTGTDVATEEPPE 213
            || :|:.:..:..|.|..|  |:....:..:::|....|||.|...:|...|          ||.
plant    11 GD-EDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEFNHPLTNPNGVTVALHIG----------PPS 64

  Fly   214 EEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCG 278
            .:  ::.|....:.:...|      |.|:..:      |.:...  .||.      :.:.|.||.
plant    65 SD--KETLSGGNNQEGLTA------RQGQYWI------PSLSQI--LVGP------TQFSCSVCN 107

  Fly   279 NIYPTQARLTEHMKFHS-----------GVKPHE------CEICGRGFVQN------------QQ 314
            ..:.....:..||..|.           |.|...      |..|..|...|            :.
plant   108 KTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRT 172

  Fly   315 LVRHMNTHTGNRPYKC-NYCPAAFADRSTKTKHHRIHTKE--RPYVCDVCSRTFTYSDNLKFH-K 375
            |..|.....|.:|::| ..|...||.|.    ..|.|.|.  :.:.| ||...|.:..:||.| :
plant   173 LQTHYKRKHGAKPFRCRKKCEKTFAVRG----DWRTHEKNCGKLWFC-VCGSDFKHKRSLKDHVR 232

  Fly   376 MIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKAEDVKGE 428
            ....|...|                    |.:.|:....||:|..:.|:.:.|
plant   233 AFGDGHAAH--------------------TVSDRVVGIGDADEDDEEEEEEEE 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 35/179 (20%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
zf-H2C2_2 287..311 CDD:290200 8/40 (20%)
C2H2 Zn finger 302..322 CDD:275368 6/31 (19%)
zf-H2C2_2 315..338 CDD:290200 6/23 (26%)
C2H2 Zn finger 330..350 CDD:275368 6/20 (30%)
zf-H2C2_2 345..367 CDD:290200 7/23 (30%)
C2H2 Zn finger 358..378 CDD:275368 7/20 (35%)
zf-H2C2_2 370..394 CDD:290200 5/24 (21%)
C2H2 Zn finger 386..406 CDD:275368 0/19 (0%)
DOT5NP_172787.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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