DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trem and ZNF93

DIOPT Version :10

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_112495.2 Gene:ZNF93 / 81931 HGNCID:13169 Length:620 Species:Homo sapiens


Alignment Length:325 Identity:99/325 - (30%)
Similarity:142/325 - (43%) Gaps:70/325 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 IEEAETYAEYEEYELLTNE-----NSPEIAQEKG---------STGTDVATEEPP-------EEE 215
            ||..:.:.::.  .|:|::     ..|.|.:|.|         :|...:.|.|.|       :..
Human   176 IECGKAFNQFS--TLITHKKIHTGEKPYICEECGKAFKYSSALNTHKRIHTGEKPYKCDKCDKAF 238

  Fly   216 IAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNI 280
            ||...| |..:...|..||.||:..|:   |::::|...:..|...|.||      |.|:.||..
Human   239 IASSTL-SKHEIIHTGKKPYKCEECGK---AFNQSSTLTKHKKIHTGEKP------YKCEECGKA 293

  Fly   281 YPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRST--- 342
            :...:.||:|.|.|:|.||:.||.||:.|..::.|..|...|||.:|||||.|..||...||   
Human   294 FNQSSTLTKHKKIHTGEKPYVCEECGKAFKYSRILTTHKRIHTGEKPYKCNKCGKAFIASSTLSR 358

  Fly   343 -------------------------KTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEK 382
                                     .|:|.|:||.|:||.|:.|.:.|.||..|..||..|||||
Human   359 HEFIHMGKKHYKCEECGKAFIWSSVLTRHKRVHTGEKPYKCEECGKAFKYSSTLSSHKRSHTGEK 423

  Fly   383 PHVCDLCGKGFVKAYKLRLHRETHNRRITWR--------NDAEESTKAEDV-KGETPEFLNELPK 438
            |:.|:.|||.||.:..|..|...|..:..::        |.:...||.:.: .||.|....|..|
Human   424 PYKCEECGKAFVASSTLSKHEIIHTGKKPYKCEECGKAFNQSSSLTKHKKIHTGEKPYKCEECGK 488

  Fly   439  438
            Human   489  488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 65/174 (37%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 10/47 (21%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
ZNF93NP_112495.2 KRAB 4..62 CDD:214630
C2H2 Zn finger 147..167 CDD:275368
COG5048 170..612 CDD:227381 99/325 (30%)
C2H2 Zn finger 175..195 CDD:275368 4/20 (20%)
C2H2 Zn finger 203..223 CDD:275368 3/19 (16%)
C2H2 Zn finger 231..251 CDD:275368 4/20 (20%)
C2H2 Zn finger 259..279 CDD:275368 5/22 (23%)
C2H2 Zn finger 287..307 CDD:275368 7/19 (37%)
C2H2 Zn finger 315..335 CDD:275368 7/19 (37%)
C2H2 Zn finger 343..363 CDD:275368 7/19 (37%)
C2H2 Zn finger 371..391 CDD:275368 3/19 (16%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
C2H2 Zn finger 427..447 CDD:275368 8/19 (42%)
C2H2 Zn finger 455..475 CDD:275368 3/19 (16%)
C2H2 Zn finger 483..503 CDD:275368 2/6 (33%)
C2H2 Zn finger 511..531 CDD:275368
C2H2 Zn finger 539..559 CDD:275368
C2H2 Zn finger 567..587 CDD:275368
C2H2 Zn finger 595..615 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.