DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trem and ZFP2

DIOPT Version :10

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_085116.2 Gene:ZFP2 / 80108 HGNCID:26138 Length:461 Species:Homo sapiens


Alignment Length:209 Identity:80/209 - (38%)
Similarity:104/209 - (49%) Gaps:28/209 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 THAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFH 294
            |..||.:|.:.|:   |:.|:|......:...|.||      |.|:.||..:.....|.||.:.|
Human   265 TGEKPYECSQCGK---AFSKSSTLTLHQRNHTGEKP------YKCNKCGKSFSQSTYLIEHQRLH 320

  Fly   295 SGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCD 359
            |||||.||..||:.|.:|..|.:|...|||.:||:|..|...|..||:.|.|..|||.|:||.|:
Human   321 SGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECN 385

  Fly   360 VCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKAED 424
            .|.:.|:.|..|..|:.|||||||:.||.|||.|:|...|.:|:.||.                 
Human   386 ECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHT----------------- 433

  Fly   425 VKGETPEFLNELPK 438
              ||.|...||..|
Human   434 --GEKPYQCNECGK 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 65/146 (45%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
ZFP2NP_085116.2 COG5048 99..451 CDD:227381 80/209 (38%)
C2H2 Zn finger 104..124 CDD:275368
C2H2 Zn finger 132..152 CDD:275368
C2H2 Zn finger 160..180 CDD:275368
C2H2 Zn finger 188..208 CDD:275368
C2H2 Zn finger 216..236 CDD:275368
C2H2 Zn finger 244..264 CDD:275368
C2H2 Zn finger 272..292 CDD:275368 5/22 (23%)
C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
C2H2 Zn finger 328..348 CDD:275368 7/19 (37%)
C2H2 Zn finger 356..376 CDD:275368 7/19 (37%)
C2H2 Zn finger 384..404 CDD:275368 6/19 (32%)
C2H2 Zn finger 412..432 CDD:275368 9/19 (47%)
C2H2 Zn finger 440..460 CDD:275368 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.