DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZNF408

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_079017.1 Gene:ZNF408 / 79797 HGNCID:20041 Length:720 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381
C2H2 Zn finger 274..294 CDD:275368
zf-H2C2_2 287..311 CDD:290200
C2H2 Zn finger 302..322 CDD:275368
zf-H2C2_2 315..338 CDD:290200
C2H2 Zn finger 330..350 CDD:275368
zf-H2C2_2 345..367 CDD:290200
C2H2 Zn finger 358..378 CDD:275368
zf-H2C2_2 370..394 CDD:290200
C2H2 Zn finger 386..406 CDD:275368
ZNF408NP_079017.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..350
COG5048 <308..516 CDD:227381
C2H2 Zn finger 355..375 CDD:275368
zf-H2C2_2 367..392 CDD:290200
C2H2 Zn finger 383..403 CDD:275368
C2H2 Zn finger 411..431 CDD:275368
zf-H2C2_2 423..448 CDD:290200
C2H2 Zn finger 439..490 CDD:275368
COG5048 <475..642 CDD:227381
zf-H2C2_2 482..507 CDD:290200
C2H2 Zn finger 498..518 CDD:275368
zf-H2C2_2 510..533 CDD:290200
C2H2 Zn finger 526..546 CDD:275368
C2H2 Zn finger 553..573 CDD:275368
zf-H2C2_2 566..589 CDD:290200
C2H2 Zn finger 581..601 CDD:275368
zf-H2C2_2 594..617 CDD:290200
C2H2 Zn finger 609..629 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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