DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ovol1a

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_021333289.1 Gene:ovol1a / 792456 ZFINID:ZDB-GENE-031010-37 Length:319 Species:Danio rerio


Alignment Length:302 Identity:89/302 - (29%)
Similarity:123/302 - (40%) Gaps:72/302 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 DTNMFD-----VHDPTQPVP-NEIEEAETYAEYEEYELL--TNENSPEIAQEKGSTGTDVATEEP 211
            |.||:.     .:||...|| .|:.......:..|.|.:  |..|:....:.|.:|| ::.||.|
Zfish    61 DRNMYTHSQMYTNDPGAVVPVAELPSCTALGQSPETEHIRSTQNNTYVRTKIKVTTG-ELPTEAP 124

  Fly   212 PEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKP---RNKLSTYI 273
            |   :...:..|......||..|         ||.                 ||   ::..:||:
Zfish   125 P---VVPSVTTSPPVSIATHCSP---------PVT-----------------KPLMVQSSGATYV 160

  Fly   274 CDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFA 338
            |.||..::..|..|..|:|.||..|.|.|:.||:||.....|.||:.||||.|||||..|..||.
Zfish   161 CQVCQKVFQFQRMLNRHLKCHSEQKRHLCDFCGKGFNDTFDLKRHVRTHTGVRPYKCELCDKAFT 225

  Fly   339 DRSTKTKH-HRIH-------TKERP---YVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKG 392
            .|.:...| .:||       .|||.   |||:.|..|.:..|.|..|  :|| |.|:      ..
Zfish   226 QRCSLESHMKKIHGVTQQYAYKERRSKLYVCEECGHTASTQDALLRH--LHT-EHPN------SA 281

  Fly   393 FVKAYKLRLHRETHNRRITWRNDAEESTKAEDVKGETPEFLN 434
            |::|...|.|..:.|           .||.:..:..:|..||
Zfish   282 FLRAKGARRHSPSLN-----------GTKDDTSQPGSPLSLN 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 59/160 (37%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
zf-H2C2_2 287..311 CDD:290200 12/23 (52%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
zf-H2C2_2 315..338 CDD:290200 14/22 (64%)
C2H2 Zn finger 330..350 CDD:275368 6/20 (30%)
zf-H2C2_2 345..367 CDD:290200 11/32 (34%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
zf-H2C2_2 370..394 CDD:290200 6/23 (26%)
C2H2 Zn finger 386..406 CDD:275368 4/19 (21%)
ovol1aXP_021333289.1 C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 173..197 CDD:316026 11/23 (48%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
zf-H2C2_2 201..226 CDD:316026 15/24 (63%)
C2H2 Zn finger 217..238 CDD:275368 6/20 (30%)
C2H2 Zn finger 256..275 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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