DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and Zfp449

DIOPT Version :10

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_084415.1 Gene:Zfp449 / 78619 MGIID:1925869 Length:518 Species:Mus musculus


Alignment Length:306 Identity:94/306 - (30%)
Similarity:131/306 - (42%) Gaps:64/306 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 EDLSVESVLKSWEDYASQLDGGMKVEGEEDQQHQ-----VITYVVE-DGDTDDTNMFDVHDPTQP 167
            :||.....:|...|  |::...|.:|.|||...:     :..:||. :|:.       :|.|.. 
Mouse   208 KDLEDPKEMKQLLD--SKIGFEMGIENEEDTSKEKKLETLYPFVVTLEGNA-------LHGPIL- 262

  Fly   168 VPNEIEEAETYAEYEEYELLTN--ENSPEIAQEKGSTGTDVATEEPPEEEIAEDILDSDEDYDPT 230
                         .::|..|.|  |.|||..|      ||:.....|:.....:..:|....:|.
Mouse   263 -------------QKDYVQLENQWETSPEDLQ------TDLTKLVDPQNPTLGETPESPSLEEPL 308

  Fly   231 HAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHS 295
            ..||.|                     ||..|.||..      |..||..:..:::||.|.:.||
Mouse   309 TPKPPK---------------------KKSPGDKPHR------CPQCGKCFARKSQLTGHQRIHS 346

  Fly   296 GVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDV 360
            |.:||:|..||:.|:::..|.||...|||.|||:|..|...|..||....|.|.|::|..|.|..
Mouse   347 GEEPHKCPECGKRFLRSSDLYRHQRLHTGERPYECTVCKKRFTRRSHLLGHQRTHSEEETYKCLE 411

  Fly   361 CSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETH 406
            |.:||.:..:||.|...|||||||.|..|||.|.:...|.||:.||
Mouse   412 CGKTFCHGSSLKRHLKTHTGEKPHRCPNCGKSFSRLTALTLHQRTH 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 60/143 (42%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
Zfp449NP_084415.1 SCAN 27..134 CDD:128708
COG5048 <323..483 CDD:227381 58/141 (41%)
C2H2 Zn finger 325..345 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
C2H2 Zn finger 381..401 CDD:275368 7/19 (37%)
C2H2 Zn finger 409..429 CDD:275368 7/19 (37%)
C2H2 Zn finger 437..457 CDD:275368 8/19 (42%)
C2H2 Zn finger 465..485 CDD:275368
zf-H2C2_2 477..502 CDD:463886
C2H2 Zn finger 493..513 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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