DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trem and ZNF70

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_068735.1 Gene:ZNF70 / 7621 HGNCID:13140 Length:446 Species:Homo sapiens


Alignment Length:331 Identity:100/331 - (30%)
Similarity:139/331 - (41%) Gaps:53/331 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 TYVVEDGDTDDTNMF---DVHDP---------TQPVPNEIEEAETYAEYEEYELLTNENSPEIAQ 197
            |:..|:.......:|   |:.||         ...:..||...|...|.::||...:..|..:..
Human    12 TFAFENRLESQQGLFPGEDLGDPFLQERGLEQMAVIYKEIPLGEQDEENDDYEGNFSLCSSPVQH 76

  Fly   198 EKGSTGTD----------------------VATEEPPEEEIAE-DILDSDED---YDPTHAKPEK 236
            :....||.                      :.:|||...:.|| |..||..:   ..|..|||..
Human    77 QSIPPGTRPQDDELFGQTFLQKSDLSMCQIIHSEEPSPCDCAETDRGDSGPNAPHRTPQPAKPYA 141

  Fly   237 CDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHE 301
            |...|:   |:.::|..:.......|.||      |.|..||..:...:.|..|...|:|.||:|
Human   142 CRECGK---AFSQSSHLLRHLVIHTGEKP------YECCECGKAFSQSSHLLRHQIIHTGEKPYE 197

  Fly   302 CEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFT 366
            |..||:.|.|:..|.:|...|||.|||:|..|...|:..|:..||.||||.||||.|..|.::|.
Human   198 CRECGKAFRQSSALTQHQKIHTGKRPYECRECGKDFSRSSSLRKHERIHTGERPYQCKECGKSFN 262

  Fly   367 YSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRND------AEESTKAEDV 425
            .|..|..|:.|||.:|||.||||||.|.....|..|:..|..:..::.|      ::.|...|..
Human   263 QSSGLSQHRKIHTLKKPHECDLCGKAFCHRSHLIRHQRIHTGKKPYKCDECGKAFSQSSNLIEHR 327

  Fly   426 KGETPE 431
            |..|.|
Human   328 KTHTGE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 62/146 (42%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
zf-H2C2_2 315..338 CDD:290200 10/22 (45%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 345..367 CDD:290200 13/21 (62%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
zf-H2C2_2 370..394 CDD:290200 14/23 (61%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
ZNF70NP_068735.1 C2H2 Zn finger 92..108 CDD:275368 0/15 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..138 6/23 (26%)
COG5048 138..442 CDD:227381 75/205 (37%)
C2H2 Zn finger 142..162 CDD:275368 4/22 (18%)
C2H2 Zn finger 170..190 CDD:275368 5/19 (26%)
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
C2H2 Zn finger 310..330 CDD:275368 4/19 (21%)
C2H2 Zn finger 338..358 CDD:275368
C2H2 Zn finger 366..386 CDD:275368
C2H2 Zn finger 394..413 CDD:275368
C2H2 Zn finger 421..441 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.