DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZNF43

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001243582.1 Gene:ZNF43 / 7594 HGNCID:13109 Length:818 Species:Homo sapiens


Alignment Length:214 Identity:82/214 - (38%)
Similarity:112/214 - (52%) Gaps:31/214 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 KPEKCDRSGRKPVAYHKNSPKVETFKKKV--GRKPR------------NKLST----------YI 273
            ||.||:..|:   |:  |.|...|..|::  |.||.            :.|:|          |.
Human   321 KPYKCEECGK---AF--NWPSTLTKHKRIHTGEKPYTCEECGKAFNQFSNLTTHKRIHTAEKFYK 380

  Fly   274 CDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFA 338
            |..||..:...:.||:|.|.|:..||::||.||:.|..:.:|..|..||||.:||||..|..||.
Human   381 CTECGEAFSRSSNLTKHKKIHTEKKPYKCEECGKAFKWSSKLTEHKLTHTGEKPYKCEECGKAFN 445

  Fly   339 DRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHR 403
            ..||.|||:||||.|:||.|:||.:.|....||..||.|||.|||:.|:.|||.|.::..|..|:
Human   446 WPSTLTKHNRIHTGEKPYKCEVCGKAFNQFSNLTTHKRIHTAEKPYKCEECGKAFSRSSNLTKHK 510

  Fly   404 ETHNRRITWRNDAEESTKA 422
            :.|..:..::  .||..||
Human   511 KIHIEKKPYK--CEECGKA 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 67/168 (40%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
zf-H2C2_2 287..311 CDD:290200 12/23 (52%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
zf-H2C2_2 315..338 CDD:290200 12/22 (55%)
C2H2 Zn finger 330..350 CDD:275368 10/19 (53%)
zf-H2C2_2 345..367 CDD:290200 13/21 (62%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
zf-H2C2_2 370..394 CDD:290200 14/23 (61%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZNF43NP_001243582.1 KRAB 13..72 CDD:214630
KRAB 13..52 CDD:279668
C2H2 Zn finger 158..177 CDD:275370
C2H2 Zn finger 185..205 CDD:275368
C2H2 Zn finger 213..233 CDD:275368
C2H2 Zn finger 241..261 CDD:275368
C2H2 Zn finger 269..289 CDD:275368
COG5048 295..763 CDD:227381 82/214 (38%)
C2H2 Zn finger 297..317 CDD:275368
zf-H2C2_2 309..333 CDD:290200 6/16 (38%)
C2H2 Zn finger 325..345 CDD:275368 7/24 (29%)
zf-H2C2_2 338..362 CDD:290200 5/23 (22%)
C2H2 Zn finger 353..373 CDD:275368 2/19 (11%)
C2H2 Zn finger 381..401 CDD:275368 7/19 (37%)
zf-H2C2_2 393..417 CDD:290200 11/23 (48%)
C2H2 Zn finger 409..429 CDD:275368 7/19 (37%)
zf-H2C2_2 422..445 CDD:290200 12/22 (55%)
C2H2 Zn finger 437..457 CDD:275368 10/19 (53%)
zf-H2C2_2 450..474 CDD:290200 14/23 (61%)
C2H2 Zn finger 465..485 CDD:275368 8/19 (42%)
zf-H2C2_2 477..502 CDD:290200 15/24 (63%)
C2H2 Zn finger 521..541 CDD:275368 4/7 (57%)
zf-H2C2_2 534..558 CDD:290200
C2H2 Zn finger 549..569 CDD:275368
zf-H2C2_2 562..586 CDD:290200
C2H2 Zn finger 577..597 CDD:275368
zf-H2C2_2 589..614 CDD:290200
C2H2 Zn finger 605..625 CDD:275368
zf-H2C2_2 617..642 CDD:290200
C2H2 Zn finger 633..653 CDD:275368
C2H2 Zn finger 661..681 CDD:275368
zf-H2C2_2 674..697 CDD:290200
C2H2 Zn finger 689..709 CDD:275368
zf-H2C2_2 702..726 CDD:290200
C2H2 Zn finger 717..737 CDD:275368
zf-H2C2_2 729..754 CDD:290200
COG5048 742..>803 CDD:227381
C2H2 Zn finger 745..765 CDD:275368
zf-H2C2_2 757..782 CDD:290200
C2H2 Zn finger 773..793 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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