DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and OVOL3

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_016882679.1 Gene:OVOL3 / 728361 HGNCID:14186 Length:213 Species:Homo sapiens


Alignment Length:125 Identity:45/125 - (36%)
Similarity:63/125 - (50%) Gaps:12/125 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 PRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYK 329
            ||.. .|..|.:|...:|.|..||.|:|.||.|:.|.|..||:||.....|.|||.||||.||::
Human    87 PRGP-GTLGCPLCPKAFPLQRMLTRHLKCHSPVRRHLCRCCGKGFHDAFDLKRHMRTHTGIRPFR 150

  Fly   330 CNYCPAAFADRSTKTKH-HRIH----------TKERPYVCDVCSRTFTYSDNLKFHKMIH 378
            |:.|..||..|.:...| .::|          .:|:.:||:.|..|.:..|....|:.:|
Human   151 CSACGKAFTQRCSLEAHLAKVHGQPASYAYRERREKLHVCEDCGFTSSRPDTYAQHRALH 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 45/125 (36%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
zf-H2C2_2 287..311 CDD:290200 13/23 (57%)
C2H2 Zn finger 302..322 CDD:275368 9/19 (47%)
zf-H2C2_2 315..338 CDD:290200 13/22 (59%)
C2H2 Zn finger 330..350 CDD:275368 6/20 (30%)
zf-H2C2_2 345..367 CDD:290200 7/32 (22%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
zf-H2C2_2 370..394 CDD:290200 2/9 (22%)
C2H2 Zn finger 386..406 CDD:275368
OVOL3XP_016882679.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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