DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and Zfp566

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_690027.1 Gene:Zfp566 / 72556 MGIID:1919806 Length:386 Species:Mus musculus


Alignment Length:442 Identity:109/442 - (24%)
Similarity:165/442 - (37%) Gaps:122/442 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SNEKWVVCRVCLNNPSEGEELLHDIFSETASTRLDQMLHICAGIPVSLDDNFPDKMCSKCVRCLR 69
            |.|:|    .||.  .|..:|..|:..|..|..|..:|.                  |:| ...:
Mouse    16 SQEEW----ECLT--EEQRDLYRDVMLENYSNLLSMVLE------------------SRC-EAQK 55

  Fly    70 LCYKFRL-TCQRSHQHIMDMLDREASNANAAGEGDLLSIAEDLSVESV--LKSWEDYASQLDGGM 131
            |..|..| ..:.:...||..|.|                 :||...|:  .:.|..:..:..|  
Mouse    56 LFLKKELYEIETAQWEIMRKLTR-----------------QDLQCSSLSSAREWHGHRERQRG-- 101

  Fly   132 KVEGEEDQQHQVITYVVEDGDTDDTNMFDVHDPTQPVPNEIEEAETYAEYEEYELLTNENSPEIA 196
                  .|:.|....::...|....:..    |:..:...|:..|.|.       .:.||     
Mouse   102 ------SQERQFSELIINRDDVPTLSQC----PSFRLQQIIKNKEKYC-------ASKEN----- 144

  Fly   197 QEKGSTGTDVATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSG---RKP--VAYHKNSPKVET 256
            :|....|:..||.:         |:.:.|       ||.:|...|   |.|  :.:|.   |:.|
Mouse   145 REHYKHGSRFATHQ---------IVRTTE-------KPYECKDCGKTFRHPSGLTHHH---KIHT 190

  Fly   257 FKK-----------------------KVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVK 298
            .||                       ..|.||      |.|..||..:.:.:..|.|.:.|:|.|
Mouse   191 GKKPFECKECGKTFICGSDLTRHHRIHTGEKP------YECKDCGKAFSSGSNFTRHQRIHTGEK 249

  Fly   299 PHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSR 363
            |:||:.||:.|.......:|...|||.:||:|..|..||:..|...||.||||.|:||.|..|.:
Mouse   250 PYECKECGKAFSSGSNFTQHQRIHTGEKPYECKECGNAFSQSSQLIKHQRIHTGEKPYECKECEK 314

  Fly   364 TFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRND 415
            .|....:|..|:.|||||||:.|.:|||.:.::.:|..|...|..:..:.::
Mouse   315 AFRSGSDLTRHQRIHTGEKPYECKICGKAYSQSSQLISHHRIHGGKKAYEDE 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871 15/76 (20%)
COG5048 <264..411 CDD:227381 56/146 (38%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
zf-H2C2_2 315..338 CDD:290200 9/22 (41%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
zf-H2C2_2 345..367 CDD:290200 12/21 (57%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
zf-H2C2_2 370..394 CDD:290200 13/23 (57%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
Zfp566NP_690027.1 KRAB 6..>48 CDD:214630 11/37 (30%)
KRAB 6..45 CDD:279668 11/34 (32%)
zf-C2H2 167..189 CDD:278523 6/24 (25%)
C2H2 Zn finger 169..189 CDD:275368 6/22 (27%)
zf-H2C2_2 182..204 CDD:290200 5/24 (21%)
COG5048 <193..355 CDD:227381 57/167 (34%)
C2H2 Zn finger 197..217 CDD:275368 0/19 (0%)
zf-H2C2_2 209..234 CDD:290200 7/30 (23%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
zf-H2C2_2 237..262 CDD:290200 11/24 (46%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
zf-H2C2_2 265..290 CDD:290200 10/24 (42%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 294..318 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 5/19 (26%)
zf-H2C2_2 321..346 CDD:290200 13/24 (54%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
C2H2 Zn finger 365..384 CDD:275368 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I4340
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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