DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trem and ZNF492

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_065906.1 Gene:ZNF492 / 57615 HGNCID:23707 Length:531 Species:Homo sapiens


Alignment Length:191 Identity:76/191 - (39%)
Similarity:104/191 - (54%) Gaps:13/191 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 KPEKCDRSGRKPVAYHKNSPKVETFKK-KVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSG 296
            ||.||...|:   ||::.| .:.|.|: ..|:||      |.|:.||..:...:.||.|...|:|
Human   167 KPYKCKECGK---AYNETS-NLSTHKRIHTGKKP------YKCEECGKAFNRLSHLTTHKIIHTG 221

  Fly   297 VKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVC 361
            .||::||.||:.|.|:..|..|...|||.:||||..|..||:..||.|.|..||..|:||.|:.|
Human   222 KKPYKCEECGKAFNQSANLTTHKRIHTGEKPYKCEECGRAFSQSSTLTAHKIIHAGEKPYKCEEC 286

  Fly   362 SRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKA 422
            .:.|:.|..|..||:||||||.:.|:.|||.|.:...|..|:..|:....::  .||..||
Human   287 GKAFSQSSTLTTHKIIHTGEKFYKCEECGKAFSQLSHLTTHKRIHSGEKPYK--CEECGKA 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 61/146 (42%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
zf-H2C2_2 287..311 CDD:290200 12/23 (52%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
zf-H2C2_2 315..338 CDD:290200 11/22 (50%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
zf-H2C2_2 345..367 CDD:290200 9/21 (43%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
zf-H2C2_2 370..394 CDD:290200 13/23 (57%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZNF492NP_065906.1 KRAB <1..32 CDD:214630
COG5048 138..522 CDD:227381 76/191 (40%)
C2H2 Zn finger 143..163 CDD:275368
zf-H2C2_2 155..179 CDD:290200 6/14 (43%)
C2H2 Zn finger 171..191 CDD:275368 7/23 (30%)
zf-H2C2_2 183..208 CDD:290200 9/30 (30%)
C2H2 Zn finger 199..219 CDD:275368 6/19 (32%)
zf-H2C2_2 211..236 CDD:290200 12/24 (50%)
C2H2 Zn finger 227..247 CDD:275368 8/19 (42%)
zf-H2C2_2 239..264 CDD:290200 12/24 (50%)
C2H2 Zn finger 255..275 CDD:275368 8/19 (42%)
C2H2 Zn finger 283..303 CDD:275368 7/19 (37%)
C2H2 Zn finger 311..331 CDD:275368 7/19 (37%)
zf-H2C2_2 323..348 CDD:290200 7/25 (28%)
C2H2 Zn finger 339..359 CDD:275368 4/7 (57%)
C2H2 Zn finger 367..387 CDD:275368
zf-H2C2_2 379..403 CDD:290200
C2H2 Zn finger 395..415 CDD:275368
zf-H2C2_2 408..432 CDD:290200
C2H2 Zn finger 423..443 CDD:275368
C2H2 Zn finger 451..471 CDD:275368
zf-H2C2_2 463..488 CDD:290200
C2H2 Zn finger 479..499 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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