DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZNF490

DIOPT Version :10

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_065765.1 Gene:ZNF490 / 57474 HGNCID:23705 Length:529 Species:Homo sapiens


Alignment Length:434 Identity:105/434 - (24%)
Similarity:151/434 - (34%) Gaps:138/434 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSWEDYASQLDGGMK----------------- 132
            ::.|.:.|....:...:.|.:|: ||::|...|:.|    :.||.|.:                 
Human    37 VLQMQNSEHHGQSIKTQTDSISL-EDVAVNFTLEEW----ALLDPGQRNIYRDVMRATFKNLACI 96

  Fly   133 --------VEGEEDQQHQVI--------------------TYVVEDGDTD--------------- 154
                    :|.|...|.:.:                    |..:.|.:|:               
Human    97 GEKWKDQDIEDEHKNQGRNLRSPMVEALCENKEDCPCGKSTSQIPDLNTNLETPTGLKPCDCSVC 161

  Fly   155 -DTNMFDV------HDPTQPVPNEIEEAETYAEYEEYELLTNENSPEIAQEKGSTGT-------- 204
             :..|..|      ...|:..|||..|   |.|           .|...:|.|.|.|        
Human   162 GEVFMHQVSLNRHMRSHTEQKPNECHE---YGE-----------KPHKCKECGKTFTRSSSIRTH 212

  Fly   205 -DVATEEPPEE--------------------EIAEDILDSDE--------------DYDPTHAKP 234
             .:.|.|.|.|                    ...|...:..|              :.:.|..||
Human   213 ERIHTGEKPYECKECGKAFAFLFSFRNHIRIHTGETPYECKECGKAFRYLTALRRHEKNHTGEKP 277

  Fly   235 EKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKP 299
            .||.:.|:..:.|   .|.:...:...|.||      |.|..||..:.....|..|.|.|:|.||
Human   278 YKCKQCGKAFIYY---QPFLTHERTHTGEKP------YECKQCGKAFSCPTYLRSHEKTHTGEKP 333

  Fly   300 HECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRT 364
            ..|..|||.|..:..|.:|:.||||.:||.|..|..||...|:...|.|.|..|:||.|..|.:.
Human   334 FVCRECGRAFFSHSSLRKHVKTHTGVQPYTCKKCGEAFKSSSSCEVHERTHFGEKPYECKQCGKA 398

  Fly   365 FTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNR 408
            |..|..|:.|:.:|||||.:.|..|||.|:.:...|:|..||.|
Human   399 FNSSSYLQLHERVHTGEKTYECKECGKAFLYSTHFRIHERTHTR 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871 0/1 (0%)
COG5048 <264..411 CDD:227381 58/145 (40%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZNF490NP_065765.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 2/15 (13%)
KRAB 56..97 CDD:460171 9/45 (20%)
C2H2 Zn finger 133..150 CDD:275368 3/16 (19%)
C2H2 Zn finger 158..178 CDD:275368 2/19 (11%)
COG5048 192..>505 CDD:227381 78/260 (30%)
C2H2 Zn finger 196..216 CDD:275368 4/19 (21%)
C2H2 Zn finger 224..244 CDD:275368 0/19 (0%)
C2H2 Zn finger 252..272 CDD:275368 1/19 (5%)
C2H2 Zn finger 280..300 CDD:275368 4/22 (18%)
C2H2 Zn finger 308..328 CDD:275368 6/19 (32%)
C2H2 Zn finger 336..356 CDD:275368 7/19 (37%)
C2H2 Zn finger 364..384 CDD:275368 7/19 (37%)
C2H2 Zn finger 392..412 CDD:275368 6/19 (32%)
C2H2 Zn finger 420..440 CDD:275368 7/19 (37%)
C2H2 Zn finger 448..468 CDD:275368
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 504..524 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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