DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and Zfp113

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_062721.2 Gene:Zfp113 / 56314 MGIID:1929116 Length:439 Species:Mus musculus


Alignment Length:331 Identity:93/331 - (28%)
Similarity:147/331 - (44%) Gaps:71/331 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LDREASNAN----AAGEGDLLSIAEDLSVESVLKSWEDYASQLDGGMKVEGEEDQQHQVITYVVE 149
            ||.::...|    :.|.|         |.|.:|..::...||   |:|.|...:|:   ::...:
Mouse    91 LDGDSKTGNDRVISEGMG---------SCEMILGRFQKDVSQ---GLKFEEAYEQE---VSLQRQ 140

  Fly   150 DGDTD----DTNMFDVHDPTQPVPNEIEEAETY-----AEYEEYELLTNENSPEIAQEKGSTGTD 205
            .|::.    :..:.:.|..      .:||..|:     .:|.|:......||..|:.::...|. 
Mouse   141 LGNSSVGRLNRKIQEFHQV------RVEEKLTHIGERNKKYSEFGNSFTVNSKLISHQRLQMGD- 198

  Fly   206 VATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLS 270
                                       ||.|||...:   ::::.|..::..:...|.||     
Mouse   199 ---------------------------KPHKCDECSK---SFNRTSDLIQHQRIHTGEKP----- 228

  Fly   271 TYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPA 335
             |.|..||..:...|.|.:|.:.|:|.||:||:.||:.|..:..|:.|...|||.:||:||.|..
Mouse   229 -YECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQRIHTGEKPYECNECGK 292

  Fly   336 AFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLR 400
            .|:..||.|.|.||||.|:||.|:.|.:.|:.|..|..|:.|||||||:.|:.|||.|.::..|.
Mouse   293 TFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLY 357

  Fly   401 LHRETH 406
            .|:..|
Mouse   358 QHQRIH 363

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 61/143 (43%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
zf-H2C2_2 315..338 CDD:290200 10/22 (45%)
C2H2 Zn finger 330..350 CDD:275368 9/19 (47%)
zf-H2C2_2 345..367 CDD:290200 11/21 (52%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
zf-H2C2_2 370..394 CDD:290200 13/23 (57%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
Zfp113NP_062721.2 zf-H2C2_2 243..268 CDD:290200 11/24 (46%)
C2H2 Zn finger 259..279 CDD:275368 6/19 (32%)
zf-H2C2_2 275..295 CDD:290200 9/19 (47%)
C2H2 Zn finger 287..307 CDD:275368 9/19 (47%)
zf-H2C2_2 300..324 CDD:290200 12/23 (52%)
C2H2 Zn finger 315..335 CDD:275368 6/19 (32%)
zf-H2C2_2 331..352 CDD:290200 13/20 (65%)
C2H2 Zn finger 343..363 CDD:275368 7/19 (37%)
zf-H2C2_2 355..380 CDD:290200 3/9 (33%)
C2H2 Zn finger 371..391 CDD:275368
zf-H2C2_2 384..408 CDD:290200
C2H2 Zn finger 399..419 CDD:275368