Protein Alignment trem and ZIPIC

DIOPT Version :10

• Sequence 1: NP_650861.1
• Gene: trem / 42392
• FlyBaseID: FBgn0038767
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_651765.1
• Gene: ZIPIC / 43566
• FlyBaseID: FBgn0039740
• Length: 457
• Species: Drosophila melanogaster
• Alignment Length: 438
• Identity: 96/438 - (21%)
• Similarity: 165/438 - (37%)
• Gaps: 107/438 - (24%)

  Fly    60 MCSKCVRCLRLCYKFRLTCQRSHQHIMDML-------DREASNANAAGEGDLLSIAEDLSVESVL 117
            :|.||...|...:|.....::....|::::       |.:.::..          .:||..|:.:
  Fly    50 ICKKCCEKLARYHKSIQIARKLRGEILELIHSPYMSKDHKQTSYK----------EDDLDRETTI 104

  Fly   118 KSWEDYASQLDGGMKVEGEEDQQHQVI------------------------TYVVEDGDTDD--- 155
                   |:.||.::...::|::.|.:                        |::::..:.:|
  Fly   105 -------SKFDGNIEEAQQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEHTFIIKQSEEEDEFH 162

  Fly   156 -------------TNMFDVHDPTQPVPNEIEEAETYAEYEEYELLTNENSPEIAQEKGSTGTDVA 207
                         .|..:.|: .:.|.:||||..  .|.||.:||.::.  :.|||:.....|..
  Fly   163 SVDLELDIDNEIIINEEEAHE-VEEVAHEIEEVA--HEIEEEDLLPHDK--QEAQEEDFFKEDTM 222

  Fly   208 TE-----EPPEEEIAEDILDSDEDYDPT---------HAKPEKCDRSGRKPVAYHKNSPKVETFK 258
            ::     :...|.|..|..|.::|.:.:         .:.|||.  |.|:....|..
  Fly   223 SDFDEHLDGAIEYIISDGEDQEQDNESSGEYTVNIQCPSCPEKF--SSRRAYNVHTK-------- 277

  Fly   259 KKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHT 323
                   |.....|:||.||....:.:....|::.|..||...|.:|...|.:..:|..||..|:
  Fly   278 -------REHFPGYVCDQCGKTLQSYSGFIGHLQNHEPVKQFACPVCPERFSRKFRLKHHMAWHS 335

  Fly   324 GNRPYKCNYCPAAFADRSTKTKHHRIHTKE-RPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCD 387
            |..||:|:.|...|..:....||..||..| :...|.||........:|:.|...|||:||..|.
  Fly   336 GETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHMRSHTGDKPFACP 400

  Fly   388 LCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKAEDVKGETPEFLNE 435
            :|.|.|.:.|.::.|...|....|.|:.....:|.      |..|:||
  Fly   401 VCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKC------THTFINE 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trem	NP_650861.1	zf-AD	11..87	CDD:214871	6/26 (23%)
		COG5048	<264..411	CDD:227381	45/147 (31%)
		C2H2 Zn finger	274..294	CDD:275368	5/19 (26%)
		C2H2 Zn finger	302..322	CDD:275368	6/19 (32%)
		C2H2 Zn finger	330..350	CDD:275368	5/19 (26%)
		C2H2 Zn finger	358..378	CDD:275368	5/19 (26%)
		C2H2 Zn finger	386..406	CDD:275368	6/19 (32%)
ZIPIC	NP_651765.1	C2H2 Zn finger	286..306	CDD:275368	5/19 (26%)
		C2H2 Zn finger	314..334	CDD:275368	6/19 (32%)
		SFP1	<336..419	CDD:227516	27/82 (33%)
		C2H2 Zn finger	342..391	CDD:275368	13/48 (27%)
		zf-H2C2_2	383..408	CDD:463886	11/24 (46%)
		C2H2 Zn finger	399..419	CDD:275368	6/19 (32%)
		C2H2 Zn finger	432..449	CDD:275368	5/17 (29%)