Protein Alignment trem and Zscan26

DIOPT Version :10

• Sequence 1: NP_650861.1
• Gene: trem / 42392
• FlyBaseID: FBgn0038767
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_001334420.1
• Gene: Zscan26 / 432731
• MGIID: 3531417
• Length: 466
• Species: Mus musculus
• Alignment Length: 431
• Identity: 99/431 - (22%)
• Similarity: 161/431 - (37%)
• Gaps: 118/431 - (27%)

  Fly    66 RCLRLCYKFRLTCQRSHQHIMDMLDRE--------------ASNANAAGEGDLLSIAEDLSVESV 116
            |...||.::......|.:.|:::|..|              ..:....|| :|:.|.|||
Mouse    62 RLRELCRQWLRPETHSKEQILELLVLEQFLTILPRDLQVQVLEHHPETGE-ELVGILEDL----- 120

  Fly   117 LKSWEDYASQLDGGMKVEGEEDQQHQVITYVV------------------------------EDG 151
                     |||.|...|.::..|....|.:|                              |:|
Mouse   121 ---------QLDRGKAGEQKDSAQRSRPTVLVGEPAPRREAREQPGCALPQKPEERGKETRSENG 176

  Fly   152 D----TDDTNMFDVH-DPTQPVPNEIEE-----------AETYAEYEEYELLTNENSPEIAQEKG 200
            :    ||.....:.. ..|:|:..:.|:           .:|.::..|.:....:||..|..::.
Mouse   177 NLIAGTDSCGRMESSCTMTEPIEAQCEDLSLKKNPAMPKEKTNSQCLETKERLVQNSGLIEHDRA 241

  Fly   201 STGTDVATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKP 265
            .||.........:..:|.|..:..:|      |...|...|:   .:.::|..:...|..:|.||
Mouse   242 HTGEMSWESVGSQSSVAADHQEISKD------KGHPCQECGK---VFQRSSHLIRHQKIHLGEKP 297

  Fly   266 RNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRP--- 327
                  |.|..||.::...|.|.||::.|:|.||:.|..||:.|.::..|.||...|:.:.|
Mouse   298 ------YQCKECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQKIHSQDEPREC 356

  Fly   328 -------------------------YKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTY 367
                                     :.||.|..||:..|...:||||||.|:|:.|:||.:.|..
Mouse   357 KECGKTFSRALLLTHHQRVHGRSKRHHCNECGKAFSLTSDLIRHHRIHTGEKPFKCNVCQKAFRL 421

  Fly   368 SDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNR 408
            :.:|..|..||..|||:.|..|.:.|.:...|..|:..|::
Mouse   422 NSHLDQHVRIHNEEKPYKCSECNEAFRQKSGLFQHQRHHHK 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trem	NP_650861.1	zf-AD	11..87	CDD:214871	5/20 (25%)
		COG5048	<264..411	CDD:227381	54/173 (31%)
		C2H2 Zn finger	274..294	CDD:275368	7/19 (37%)
		C2H2 Zn finger	302..322	CDD:275368	7/19 (37%)
		C2H2 Zn finger	330..350	CDD:275368	9/19 (47%)
		C2H2 Zn finger	358..378	CDD:275368	6/19 (32%)
		C2H2 Zn finger	386..406	CDD:275368	5/19 (26%)
Zscan26	NP_001334420.1	SCAN	43..151	CDD:128708	22/103 (21%)
		COG5048	<253..463	CDD:227381	63/225 (28%)
		C2H2 Zn finger	272..292	CDD:275368	4/22 (18%)
		C2H2 Zn finger	300..320	CDD:275368	7/19 (37%)
		C2H2 Zn finger	328..348	CDD:275368	7/19 (37%)
		C2H2 Zn finger	356..376	CDD:275368	0/19 (0%)
		C2H2 Zn finger	384..404	CDD:275368	9/19 (47%)
		C2H2 Zn finger	412..432	CDD:275368	6/19 (32%)
		C2H2 Zn finger	440..460	CDD:275368	5/19 (26%)