Protein Alignment trem and idc

DIOPT Version :10

• Sequence 1: NP_650861.1
• Gene: trem / 42392
• FlyBaseID: FBgn0038767
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_650862.1
• Gene: idc / 42393
• FlyBaseID: FBgn0038768
• Length: 521
• Species: Drosophila melanogaster
• Alignment Length: 507
• Identity: 198/507 - (39%)
• Similarity: 259/507 - (51%)
• Gaps: 127/507 - (25%)

  Fly     5 SNEKWVVCRVCLNNPSEGEELLHDIFSETASTRLDQMLHICAGIPVSLDDNFPDKMCSKCVRCLR 69
            |.:||:||||||..|   :|.:..||::.:...|..|:..|.|:|:...|::|||:|.||.:.|:
  Fly    16 STQKWIVCRVCLQQP---KEPMASIFNDDSEKDLTHMIRECGGVPIKQFDHYPDKICEKCFKVLK 77

  Fly    70 LCYKFRLTCQRSHQHIMDML-----------------------DREASNANAAGEGDLLSIAEDL 111
            :.:|||.|||||:.|:...:                       |.:...|....|.|    .||.
  Fly    78 MAFKFRETCQRSYGHLRQFVGPVEVEQRPPEKKGSETATKLEPDVDPDEAEQEPEHD----EEDE 138

  Fly   112 SV---ESVLKSWEDYA--------SQLDGGMKVEGEEDQ-QHQVITYVVEDGDTDDTNMFDVHD- 163
            .|   ||.....:|.|        .:::.|:.||.|:|: .|.....|.|||..::  ::||::
  Fly   139 DVDLDESHYAEADDAAETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEE--VYDVYET 201

  Fly   164 ------PTQPVPNEIEE---AETYAEYEEYELLTNENSPEIAQEKGSTGTDVATEEPPEEEIAED 219
                  |.|...:|:.:   :|..||.|..:.:.:               |..||...|::...|
  Fly   202 YEGDLIPDQGYDHEMADQALSELSAEIEYLDQVEH---------------DQLTESAHEDDAEVD 251

  Fly   220 ILDSDEDYDPT-------HAK---------------------------------PEKCDRSGRKP 244
            :..::|::.|:       ||:                                 |.|. |.|...
  Fly   252 LNSTEEEFVPSKSVRASIHARNATKRRVNPRRSATSTASVAVESSTSKTTDRGNPLKV-RRGNSD 315

  Fly   245 VAYHKNSPKVET--------------FKKKVGRK---PRNKLSTYICDVCGNIYPTQARLTEHMK 292
            .|..|.|.|.|.              .|.|.|.|   ...|...||||||||:||:|:|||||:|
  Fly   316 SAGSKMSIKSEKDISIGEVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIK 380

  Fly   293 FHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYV 357
            .|||||||||||||..|.|.|||.||||||||||||||:||||||||.||:.|||||||.||||.
  Fly   381 VHSGVKPHECEICGHCFAQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRIHTNERPYE 445

  Fly   358 CDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRR 409
            ||||.:||||::.|||||||||||||||||:|||||.:|||||.||..|.||
  Fly   446 CDVCHKTFTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNHRVIHERR 497

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trem	NP_650861.1	zf-AD	11..87	CDD:214871	32/75 (43%)
		COG5048	<264..411	CDD:227381	112/149 (75%)
		C2H2 Zn finger	274..294	CDD:275368	15/19 (79%)
		C2H2 Zn finger	302..322	CDD:275368	14/19 (74%)
		C2H2 Zn finger	330..350	CDD:275368	15/19 (79%)
		C2H2 Zn finger	358..378	CDD:275368	14/19 (74%)
		C2H2 Zn finger	386..406	CDD:275368	14/19 (74%)
idc	NP_650862.1	zf-AD	22..95	CDD:214871	32/75 (43%)
		C2H2 Zn finger	362..382	CDD:275368	15/19 (79%)
		COG5048	386..>447	CDD:227381	49/60 (82%)
		C2H2 Zn finger	390..410	CDD:275368	14/19 (74%)
		C2H2 Zn finger	418..438	CDD:275368	15/19 (79%)
		SFP1	<424..491	CDD:227516	52/66 (79%)
		C2H2 Zn finger	446..466	CDD:275368	14/19 (74%)
		C2H2 Zn finger	474..494	CDD:275368	14/19 (74%)