Protein Alignment trem and Odj

DIOPT Version :10

• Sequence 1: NP_650861.1
• Gene: trem / 42392
• FlyBaseID: FBgn0038767
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_650661.1
• Gene: Odj / 42145
• FlyBaseID: FBgn0038551
• Length: 430
• Species: Drosophila melanogaster
• Alignment Length: 454
• Identity: 110/454 - (24%)
• Similarity: 180/454 - (39%)
• Gaps: 97/454 - (21%)

  Fly     1 MKTESNEKWVVCRVCLNNPSEGEELL----HDIFSETASTRLDQMLHICAGIPVSLDDNFPDKMC 61
            |.||       ||:|      ||.:.    .:|| |..:.|:...:....|:.:.|::..|..:|
  Fly     1 MSTE-------CRIC------GERIFTPHPKNIF-EKRNHRIRMAIEQITGLEIVLENMLPQHIC 51

  Fly    62 SKCVRCLRLCYKFRLTCQRSHQHIMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSWEDYASQ 126
            :.|:..|.....||..|..:|.::.   .|.:|.|..|.:|. ..::..|| :.:||     ...
  Fly    52 ACCLLDLTQAVAFRQRCLETHANLH---QRISSKAGVASKGS-PEVSPVLS-DPLLK-----REV 106

  Fly   127 LDGGMKVEGEEDQQHQVITYVVEDGD-TDDTNMFDVHDPTQPVPNEIEEAETYAEYEEYELLTNE 190
            ||.  .|:.|:|::     .:.:|.| .||...|            :|:.:....|
  Fly   107 LDD--TVDTEDDKE-----LLDDDKDLMDDDKDF------------LEDEKPILRY--------- 143

  Fly   191 NSPEIAQEKGSTGTDVATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKV- 254
                                ||    |:.|...|::: |....|....:..|.||....:||..
  Fly   144 --------------------PP----AKKIRIEDQNF-PNRQSPRVRVKRLRVPVVEKADSPPPP 183

  Fly   255 --ETFKKKVGRKPRNK----LSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQ 313
              |..:|...|:|:.|    :..|:||.||..:...:.:.:|...|...| ..|:.|||.|....
  Fly   184 PREHVRKPRKRRPKPKVDRSIKRYVCDQCGWSFNDHSNMKDHKLRHFEEK-FSCDECGRKFYTMP 247

  Fly   314 QLVRHMNT-HTGNRPYKCNYCPAAFADRSTKTKHHR-IHTKERPYVCDVCSRTFTYSDNLKFHKM 376
            .|..|:.. |.|.:||.|.:|...||:..::.:|.| :|..|..:.|.:|.:.|........|:.
  Fly   248 LLRLHIRVHHKGEKPYVCKFCGMGFANSPSRCRHERQMHANELVHPCKICGKRFNSEKGRLKHEE 312

  Fly   377 IHTGEKP--HVCDLCGKGFVKAYKLRLHRET--HNRRITWR-NDAEESTKAEDVKGETPEFLNE 435
            .|..::|  |:|..|.|.|.:|..|..|..|  |.:|:... |..:|..::|....|.|.::.|
  Fly   313 GHKSDQPDVHICLTCNKEFKEAQFLHRHYSTKYHRKRVNLLVNGPKEEFQSEVDPAEFPGYMEE 376

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trem	NP_650861.1	zf-AD	11..87	CDD:214871	19/79 (24%)
		COG5048	<264..411	CDD:227381	46/156 (29%)
		C2H2 Zn finger	274..294	CDD:275368	5/19 (26%)
		C2H2 Zn finger	302..322	CDD:275368	7/20 (35%)
		C2H2 Zn finger	330..350	CDD:275368	6/20 (30%)
		C2H2 Zn finger	358..378	CDD:275368	4/19 (21%)
		C2H2 Zn finger	386..406	CDD:275368	8/21 (38%)
Odj	NP_650661.1	zf-AD	5..78	CDD:462262	19/82 (23%)
		C2H2 Zn finger	209..229	CDD:275368	5/19 (26%)
		SUF4-like	212..>257	CDD:411020	12/45 (27%)
		C2H2 Zn finger	212..229	CDD:411020	3/16 (19%)
		C2H2 Zn finger	236..256	CDD:411020	7/19 (37%)
		C2H2 Zn finger	236..256	CDD:275368	7/19 (37%)
		zf-H2C2_2	249..274	CDD:463886	9/24 (38%)
		C2H2 Zn finger	265..283	CDD:275368	5/17 (29%)
		C2H2 Zn finger	298..314	CDD:275368	2/15 (13%)
		zf-C2H2_jaz	322..347	CDD:432381	9/24 (38%)
		C2H2 Zn finger	324..343	CDD:275368	7/18 (39%)