| Sequence 1: | NP_650861.1 | Gene: | trem / 42392 | FlyBaseID: | FBgn0038767 | Length: | 439 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001262343.1 | Gene: | rn / 40879 | FlyBaseID: | FBgn0267337 | Length: | 952 | Species: | Drosophila melanogaster |
| Alignment Length: | 181 | Identity: | 59/181 - (32%) |
|---|---|---|---|
| Similarity: | 88/181 - (48%) | Gaps: | 16/181 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 240 SGRKPVAYH-KNSPKVETFKKKVGRKPRNKL-----STYICDVCGNIYPTQARLTEHMKFHSGVK 298
Fly 299 PHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNY--CPAAFADRSTKTKHHRIHTKERPYVCDVC 361
Fly 362 SRTFTYSDNLKFHKMIHTGE---KPHVCDLCGKGFVKAYKLRLHRETHNRR 409 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trem | NP_650861.1 | zf-AD | 11..87 | CDD:214871 | |
| COG5048 | <264..411 | CDD:227381 | 50/156 (32%) | ||
| C2H2 Zn finger | 274..294 | CDD:275368 | 4/19 (21%) | ||
| C2H2 Zn finger | 302..322 | CDD:275368 | 9/19 (47%) | ||
| C2H2 Zn finger | 330..350 | CDD:275368 | 7/21 (33%) | ||
| C2H2 Zn finger | 358..378 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 386..406 | CDD:275368 | 6/19 (32%) | ||
| rn | NP_001262343.1 | C2H2 Zn finger | 490..510 | CDD:275368 | 4/21 (19%) |
| C2H2 Zn finger | 519..539 | CDD:275368 | 4/19 (21%) | ||
| COG5048 | 543..>647 | CDD:227381 | 39/103 (38%) | ||
| C2H2 Zn finger | 547..567 | CDD:275368 | 9/19 (47%) | ||
| zf-H2C2_2 | 559..586 | CDD:463886 | 13/26 (50%) | ||
| C2H2 Zn finger | 575..597 | CDD:275368 | 7/21 (33%) | ||
| C2H2 Zn finger | 605..625 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 636..656 | CDD:275368 | 6/19 (32%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||