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Protein Alignment trem and rn
DIOPT Version :9
Sequence 1: | NP_650861.1 |
Gene: | trem / 42392 |
FlyBaseID: | FBgn0038767 |
Length: | 439 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001262343.1 |
Gene: | rn / 40879 |
FlyBaseID: | FBgn0267337 |
Length: | 952 |
Species: | Drosophila melanogaster |
Alignment Length: | 181 |
Identity: | 59/181 - (32%) |
Similarity: | 88/181 - (48%) |
Gaps: | 16/181 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 240 SGRKPVAYH-KNSPKVETFKKKVGRKPRNKL-----STYICDVCGNIYPTQARLTEHMKFHSGVK 298
|||| |. |..|:: |..|...:...:: ..|.|..|...:...:.|::|.:.|.|:|
Fly 484 SGRK---YQCKMCPQI--FSSKADLQLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRIHLGIK 543
Fly 299 PHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNY--CPAAFADRSTKTKHHRIHTKERPYVCDVC 361
|:.||||.|.|.|...|.:|:.||||::||||.: |..||:..|....|.|.|..::|:.|:.|
Fly 544 PYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSC 608
Fly 362 SRTFTYSDNLKFHKMIHTGE---KPHVCDLCGKGFVKAYKLRLHRETHNRR 409
.:.|:...:|..|...|... |.|:|..|||.:.:...|..|.:.|..|
Fly 609 YKCFSDEPSLLEHIPKHKESKHLKTHICQYCGKSYTQETYLTKHMQKHAER 659
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR23226 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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