Protein Alignment trem and CG17568

DIOPT Version :10

• Sequence 1: NP_650861.1
• Gene: trem / 42392
• FlyBaseID: FBgn0038767
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_609951.2
• Gene: CG17568 / 35198
• FlyBaseID: FBgn0032763
• Length: 513
• Species: Drosophila melanogaster
• Alignment Length: 495
• Identity: 107/495 - (21%)
• Similarity: 194/495 - (39%)
• Gaps: 130/495 - (26%)

  Fly     9 WVVCRVCLNNPSEGEELLHDIFSETASTRLDQMLHICA----GIPVSLDDNFPDKMCSKCVRCLR 69
            |  ||:|..:.:.|...:.  .:|.:....|.:|.:..    .:.:.|:|.....:|::|...:.
  Fly    10 W--CRLCAKDDAHGNVKVQ--MNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTLIS 70

  Fly    70 LCYKFRLTCQRSH----QHIMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSW----EDYASQ 126
            ....|     ..|    |.|.::|.|..:      :||     :::.|.::.:.:    :|:...
  Fly    71 ELIDF-----AEHVTKVQDIFEVLRRTET------DGD-----QEMDVAALRQQFGLCDDDWTHI 119

  Fly   127 LDGGMKVEGEEDQQHQVITYVVEDGDTDDTNMFDVHDPTQPVPNEIEEAETYAEYE----EY--- 184
            :.....:|.|.|..:|....:::|....:|:..::....:.....:.:.:...|.|    |:
  Fly   120 IKPIPALEMESDNVYQKPAELLKDFPLAETSSQEMEISKRTTTTHLIQTKKNVEMEIPKQEFIDL 184

  Fly   185 -ELLTNENSPEIAQEKGSTGTDVATEEPPEE-----------------EIAEDILDS---DEDYD 228
             .:|..:|:.::..|      ||..|.|.||                 ::..::|||   |:|:.
  Fly   185 GPILLEKNTSQLDME------DVLDELPQEELSQPRLDSTTSPASMENDVKSEMLDSCEGDDDFL 243

  Fly   229 PTHAK----------P------------------EKCDRSGRKPVAYHKNSPKVETFKKKVGRKP 265
            |...:          |                  |||.:..|...:|.|:   :|...:::.|:.
  Fly   244 PVDGQLMDLVAVATTPNTLESTAEEKAKRGRMDCEKCGKVYRNRASYEKH---LERECRRIERRV 305

  Fly   266 RNKLSTYICDVCGNIYPTQARLTEHMK-FHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYK 329
            :...:|..||:|.....:...|..|.: .|..|||:.|:.||:.......|..|...||.:||::
  Fly   306 KVDKTTTTCDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHTESRPFE 370

  Fly   330 CNYCPAAFADRSTKTKHHRI---------------------------HTKERPYVCDVCSRTFTY 367
            |..|.|.|.:|:....|::|                           ||:||...||||...|..
  Fly   371 CTVCKAGFKNRARLKAHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKR 435

  Fly   368 SDNLKFHKMIHTGEKPHVCDLCGKGFV-----KAYKLRLH 402
            |..||.|.:.|||.:|:||:.|||.|.     :::||:.|
  Fly   436 SKTLKTHLLSHTGLRPYVCNYCGKSFACNANCRSHKLKKH 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trem	NP_650861.1	zf-AD	11..87	CDD:214871	15/83 (18%)
		COG5048	<264..411	CDD:227381	52/172 (30%)
		C2H2 Zn finger	274..294	CDD:275368	5/20 (25%)
		C2H2 Zn finger	302..322	CDD:275368	5/19 (26%)
		C2H2 Zn finger	330..350	CDD:275368	7/46 (15%)
		C2H2 Zn finger	358..378	CDD:275368	9/19 (47%)
		C2H2 Zn finger	386..406	CDD:275368	8/22 (36%)
CG17568	NP_609951.2	zf-AD	10..87	CDD:214871	16/85 (19%)
		COG5048	<313..471	CDD:227381	48/157 (31%)
		C2H2 Zn finger	314..335	CDD:275368	5/20 (25%)
		C2H2 Zn finger	343..363	CDD:275368	5/19 (26%)
		C2H2 Zn finger	371..391	CDD:275368	6/19 (32%)
		C2H2 Zn finger	398..418	CDD:275368	0/19 (0%)
		C2H2 Zn finger	426..446	CDD:275368	9/19 (47%)
		C2H2 Zn finger	454..475	CDD:275368	7/20 (35%)