DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZSCAN22

DIOPT Version :10

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_862829.1 Gene:ZSCAN22 / 342945 HGNCID:4929 Length:491 Species:Homo sapiens


Alignment Length:466 Identity:112/466 - (24%)
Similarity:185/466 - (39%) Gaps:101/466 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SEGEELLHDIFSETASTRL--------------DQMLHICAGIPVSLDDNFPDKMCSKCVRCLRL 70
            |:|.|..||..:.:.:.||              :.:.|:.|                       |
Human    32 SQGGESSHDHIAHSEAARLRFRHFRYEEASGPHEALAHLRA-----------------------L 73

  Fly    71 CYKFRLTCQRSHQHIMDMLDRE--------------ASNANAAGEGDLLSIAEDLSVESVLKSWE 121
            |.::......|.:.|:::|..|              .:.:..:|| :...:.|||:.....:.|:
Human    74 CCQWLQPEAHSKEQILELLVLEQFLGALPPEIQAWVGAQSPKSGE-EAAVLVEDLTQVLDKRGWD 137

  Fly   122 DYASQLDGGMKVEGEEDQQHQVITYVVEDGDTDDTNMFDVHDP--------------TQPVPNEI 172
            ..|...:...|.....:.:...:|..:..|.:.........:|              |:.|..:|
Human   138 PGAEPTEASCKQSDLGESEPSNVTETLMGGVSLGPAFVKACEPEGSSERSGLSGEIWTKSVTQQI 202

  Fly   173 EEAETYAEYEEYELLTNENSPEIAQEKGSTGT--DVATEEPPEEEIAEDILD---SDEDYDPTHA 232
            ...:|...|:  ::.|::...|....:.|:..  ::.::|.|..|...|::|   ::..|..:..
Human   203 HFKKTSGPYK--DVPTDQRGRESGASRNSSSAWPNLTSQEKPPSEDKFDLVDAYGTEPPYTYSGK 265

  Fly   233 KPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGV 297
            :..|| |..||   ..:::..:|..:|...||     :.|.|..||..:.....|.:|...|:|.
Human   266 RSSKC-RECRK---MFQSASALEAHQKTHSRK-----TPYACSECGKAFSRSTHLAQHQVVHTGA 321

  Fly   298 KPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCS 362
            |||||:.||:.|.:...|.:|...|||.:||||..|...|:..:..|:|.|:||.||||.||.|.
Human   322 KPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECGKTFSRSTHLTQHQRVHTGERPYECDACG 386

  Fly   363 RTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKAEDVKG 427
            :.|:.|.:|..|:.|||||||:.||.||:.|.....|..|...|:                   |
Human   387 KAFSQSTHLTQHQRIHTGEKPYKCDACGRAFSDCSALIRHLRIHS-------------------G 432

  Fly   428 ETPEFLNELPK 438
            |.|......||
Human   433 EKPYQCKVCPK 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871 13/80 (16%)
COG5048 <264..411 CDD:227381 59/146 (40%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZSCAN22NP_862829.1 C2H2 Zn finger 410..430 CDD:275368 7/19 (37%)
C2H2 Zn finger 438..458 CDD:275368 2/6 (33%)
C2H2 Zn finger 466..486 CDD:275368
SCAN 45..133 CDD:460417 15/111 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..161 3/26 (12%)
COG5048 <174..482 CDD:227381 87/300 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..249 8/46 (17%)
C2H2 Zn finger 270..290 CDD:275368 6/23 (26%)
C2H2 Zn finger 298..318 CDD:275368 5/19 (26%)
C2H2 Zn finger 326..346 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..374 CDD:275368 6/19 (32%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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