Sequence 1: | NP_650861.1 | Gene: | trem / 42392 | FlyBaseID: | FBgn0038767 | Length: | 439 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100478.1 | Gene: | Zfp287 / 303212 | RGDID: | 1308617 | Length: | 762 | Species: | Rattus norvegicus |
Alignment Length: | 483 | Identity: | 127/483 - (26%) |
---|---|---|---|
Similarity: | 195/483 - (40%) | Gaps: | 139/483 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 NFPDKMCS---KCVRCLR-LCYKFRLTCQRSHQHIMDMLDREASNANAAGE-------------G 102
Fly 103 DLLSIAEDLSVESVLKSWEDYASQLDGGMKVEGEEDQQHQVITYVVEDGDTDDTNMF-DVH-DPT 165
Fly 166 Q-------PVPNEIEEAETYAEY-------------------EEYELLTNE----NSPE------ 194
Fly 195 -------------------------------------------IAQEKGSTGTDVATEEPPEEEI 216
Fly 217 AEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETF-----------KKKVGRKP----- 265
Fly 266 --------------RN---KLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQ 313
Fly 314 QLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIH 378
Fly 379 TGEKPHVCDLCGKGFVKAYKLRLHRETH 406 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trem | NP_650861.1 | zf-AD | 11..87 | CDD:214871 | 11/35 (31%) |
COG5048 | <264..411 | CDD:227381 | 64/165 (39%) | ||
C2H2 Zn finger | 274..294 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 287..311 | CDD:290200 | 11/23 (48%) | ||
C2H2 Zn finger | 302..322 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 315..338 | CDD:290200 | 11/22 (50%) | ||
C2H2 Zn finger | 330..350 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 345..367 | CDD:290200 | 12/21 (57%) | ||
C2H2 Zn finger | 358..378 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 370..394 | CDD:290200 | 12/23 (52%) | ||
C2H2 Zn finger | 386..406 | CDD:275368 | 7/19 (37%) | ||
Zfp287 | NP_001100478.1 | SCAN | 46..133 | CDD:280241 | 19/83 (23%) |
KRAB | 168..225 | CDD:214630 | 13/56 (23%) | ||
KRAB | 168..207 | CDD:279668 | 11/38 (29%) | ||
C2H2 Zn finger | 368..388 | CDD:275368 | 2/19 (11%) | ||
zf-C2H2 | 394..416 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 396..416 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 408..433 | CDD:290200 | 11/24 (46%) | ||
COG5048 | 420..752 | CDD:227381 | 51/109 (47%) | ||
C2H2 Zn finger | 424..444 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 436..461 | CDD:290200 | 12/24 (50%) | ||
C2H2 Zn finger | 452..472 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 464..489 | CDD:290200 | 13/24 (54%) | ||
C2H2 Zn finger | 480..500 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 492..517 | CDD:290200 | 13/24 (54%) | ||
C2H2 Zn finger | 508..528 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 520..545 | CDD:290200 | 3/9 (33%) | ||
C2H2 Zn finger | 536..556 | CDD:275368 | |||
zf-H2C2_2 | 548..573 | CDD:290200 | |||
C2H2 Zn finger | 564..584 | CDD:275368 | |||
zf-C2H2 | 590..612 | CDD:278523 | |||
C2H2 Zn finger | 592..612 | CDD:275368 | |||
zf-H2C2_2 | 604..629 | CDD:290200 | |||
C2H2 Zn finger | 620..640 | CDD:275368 | |||
zf-H2C2_2 | 632..657 | CDD:290200 | |||
C2H2 Zn finger | 648..668 | CDD:275368 | |||
zf-H2C2_2 | 660..685 | CDD:290200 | |||
C2H2 Zn finger | 676..696 | CDD:275368 | |||
zf-H2C2_2 | 688..713 | CDD:290200 | |||
C2H2 Zn finger | 704..724 | CDD:275368 | |||
zf-H2C2_2 | 717..741 | CDD:290200 | |||
C2H2 Zn finger | 732..752 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |