| Sequence 1: | NP_650861.1 | Gene: | trem / 42392 | FlyBaseID: | FBgn0038767 | Length: | 439 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001188259.1 | Gene: | 5730507C01Rik / 236366 | MGIID: | 1917882 | Length: | 416 | Species: | Mus musculus |
| Alignment Length: | 355 | Identity: | 95/355 - (26%) |
|---|---|---|---|
| Similarity: | 140/355 - (39%) | Gaps: | 67/355 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 126 QLDGGMKVEGEEDQQHQVITYVVEDGDTDDTNMFDVH-----------DPTQPVPNEIEEAETY- 178
Fly 179 ------AEYEEY------------ELLTNENSPEIAQEKGSTGTDVATEEPPEEEIAEDILDSDE 225
Fly 226 DYD--------PTHAKPEKCDRSGRKPVAYHKNSPKVETFKK----KVGRKPRNKLSTYICDVCG 278
Fly 279 NIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTK 343
Fly 344 TKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNR 408
Fly 409 RITWRNDAEESTKAEDVKGETPEFLNELPK 438 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trem | NP_650861.1 | zf-AD | 11..87 | CDD:214871 | |
| COG5048 | <264..411 | CDD:227381 | 58/146 (40%) | ||
| C2H2 Zn finger | 274..294 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 287..311 | CDD:290200 | 11/23 (48%) | ||
| C2H2 Zn finger | 302..322 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 315..338 | CDD:290200 | 12/22 (55%) | ||
| C2H2 Zn finger | 330..350 | CDD:275368 | 8/19 (42%) | ||
| zf-H2C2_2 | 345..367 | CDD:290200 | 10/21 (48%) | ||
| C2H2 Zn finger | 358..378 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 370..394 | CDD:290200 | 14/23 (61%) | ||
| C2H2 Zn finger | 386..406 | CDD:275368 | 7/19 (37%) | ||
| 5730507C01Rik | NP_001188259.1 | KRAB | 69..>110 | CDD:214630 | 9/40 (23%) |
| KRAB | 69..106 | CDD:279668 | 9/36 (25%) | ||
| COG5048 | <119..293 | CDD:227381 | 44/176 (25%) | ||
| C2H2 Zn finger | 142..162 | CDD:275368 | 1/19 (5%) | ||
| C2H2 Zn finger | 171..190 | CDD:275368 | 3/18 (17%) | ||
| zf-H2C2_2 | 182..206 | CDD:290200 | 6/26 (23%) | ||
| C2H2 Zn finger | 198..218 | CDD:275368 | 4/22 (18%) | ||
| zf-H2C2_2 | 210..235 | CDD:290200 | 4/24 (17%) | ||
| COG5048 | <222..374 | CDD:227381 | 63/169 (37%) | ||
| C2H2 Zn finger | 226..246 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 238..263 | CDD:290200 | 11/24 (46%) | ||
| C2H2 Zn finger | 254..274 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 270..291 | CDD:290200 | 12/20 (60%) | ||
| C2H2 Zn finger | 282..302 | CDD:275368 | 8/19 (42%) | ||
| zf-H2C2_2 | 294..318 | CDD:290200 | 9/23 (39%) | ||
| C2H2 Zn finger | 310..330 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 322..346 | CDD:290200 | 14/23 (61%) | ||
| C2H2 Zn finger | 338..358 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 351..374 | CDD:290200 | 9/40 (23%) | ||
| C2H2 Zn finger | 366..386 | CDD:275368 | 2/6 (33%) | ||
| C2H2 Zn finger | 393..414 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 151 | 1.000 | Inparanoid score | I4340 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.050 | |||||