Protein Alignment trem and lin-48

DIOPT Version :9

• Sequence 1: NP_650861.1
• Gene: trem / 42392
• FlyBaseID: FBgn0038767
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_497759.1
• Gene: lin-48 / 175485
• WormBaseID: WBGene00003033
• Length: 280
• Species: Caenorhabditis elegans
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trem	NP_650861.1	zf-AD	11..87	CDD:214871
		COG5048	<264..411	CDD:227381
		C2H2 Zn finger	274..294	CDD:275368
		zf-H2C2_2	287..311	CDD:290200
		C2H2 Zn finger	302..322	CDD:275368
		zf-H2C2_2	315..338	CDD:290200
		C2H2 Zn finger	330..350	CDD:275368
		zf-H2C2_2	345..367	CDD:290200
		C2H2 Zn finger	358..378	CDD:275368
		zf-H2C2_2	370..394	CDD:290200
		C2H2 Zn finger	386..406	CDD:275368
lin-48	NP_497759.1	C2H2 Zn finger	135..155	CDD:275368
		C2H2 Zn finger	163..183	CDD:275368
		zf-H2C2_2	175..200	CDD:290200
		C2H2 Zn finger	191..209	CDD:275368

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910