| Sequence 1: | NP_650861.1 | Gene: | trem / 42392 | FlyBaseID: | FBgn0038767 | Length: | 439 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_493579.2 | Gene: | hinf-1 / 173348 | WormBaseID: | WBGene00009553 | Length: | 541 | Species: | Caenorhabditis elegans |
| Alignment Length: | 234 | Identity: | 49/234 - (20%) |
|---|---|---|---|
| Similarity: | 72/234 - (30%) | Gaps: | 82/234 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 277 CGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRH-------MNTHTGNRPYKCNYCP 334
Fly 335 AAFA-------------------------------DRSTKTKHHRIHTKERPYVCDVCSRTFTYS 368
Fly 369 DNLKFHKMIHTG---------EK---------------------PHVCDLCGKGFVKAYKLRLHR 403
Fly 404 ETHNR--------RITWRNDAEESTKAEDVK---GETPE 431 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trem | NP_650861.1 | zf-AD | 11..87 | CDD:214871 | |
| COG5048 | <264..411 | CDD:227381 | 43/209 (21%) | ||
| C2H2 Zn finger | 274..294 | CDD:275368 | 4/16 (25%) | ||
| zf-H2C2_2 | 287..311 | CDD:290200 | 10/23 (43%) | ||
| C2H2 Zn finger | 302..322 | CDD:275368 | 7/26 (27%) | ||
| zf-H2C2_2 | 315..338 | CDD:290200 | 7/29 (24%) | ||
| C2H2 Zn finger | 330..350 | CDD:275368 | 8/50 (16%) | ||
| zf-H2C2_2 | 345..367 | CDD:290200 | 8/21 (38%) | ||
| C2H2 Zn finger | 358..378 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 370..394 | CDD:290200 | 9/53 (17%) | ||
| C2H2 Zn finger | 386..406 | CDD:275368 | 5/19 (26%) | ||
| hinf-1 | NP_493579.2 | C2H2 Zn finger | 299..316 | CDD:275368 | 4/16 (25%) |
| C2H2 Zn finger | 324..344 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 359..379 | CDD:275368 | 3/19 (16%) | ||
| C2H2 Zn finger | 385..406 | CDD:275368 | 2/20 (10%) | ||
| C2H2 Zn finger | 415..435 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 442..462 | CDD:275368 | 2/19 (11%) | ||
| C2H2 Zn finger | 473..494 | CDD:275368 | 5/20 (25%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||