DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZNF480

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_653285.2 Gene:ZNF480 / 147657 HGNCID:23305 Length:535 Species:Homo sapiens


Alignment Length:239 Identity:82/239 - (34%)
Similarity:106/239 - (44%) Gaps:34/239 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 VATEEPPEEEIAEDILDSDEDYDPTH------AKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRK 264
            :.|.|.|.|......:.|:..|...|      .||.||:..|:   .:...|.....::...|.|
Human   280 IHTREKPYECNECGKVFSNNSYLARHQRIHAEEKPYKCNECGK---GFSHKSSLANHWRIYTGEK 341

  Fly   265 PRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYK 329
            |      |.||.||..:...|.|..|.|.|:|.||::|..||:.|:||..|.:|...|||.:|||
Human   342 P------YKCDECGKAFYRIALLVRHQKIHTGEKPYKCNECGKVFIQNSHLAQHWRIHTGEKPYK 400

  Fly   330 CNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFV 394
            ||.|...|...|...:|.||||.|:||.|:.|.:.|:....|..|.:|||||||:.|..|||.|.
Human   401 CNECGKVFNQLSNLARHRRIHTGEKPYKCNECGKAFSEYSGLSAHLVIHTGEKPYKCSECGKAFR 465

  Fly   395 KAYKLRLHRETHNRRITWRNDAEESTKAEDVKGETPEFLNELPK 438
            ....|..|:..|.                   ||.|...||..|
Human   466 HKLSLTNHQRIHT-------------------GERPYKCNECGK 490

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 62/146 (42%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
zf-H2C2_2 315..338 CDD:290200 11/22 (50%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 345..367 CDD:290200 11/21 (52%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
zf-H2C2_2 370..394 CDD:290200 13/23 (57%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZNF480NP_653285.2 KRAB 27..87 CDD:214630
KRAB 27..66 CDD:279668
COG5048 <158..501 CDD:227381 82/239 (34%)
C2H2 Zn finger 205..225 CDD:275368
zf-H2C2_2 217..242 CDD:290200
C2H2 Zn finger 233..253 CDD:275368
zf-H2C2_2 245..270 CDD:290200