DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and LOC1276238

DIOPT Version :10

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_061505437.1 Gene:LOC1276238 / 1276238 VectorBaseID:AGAMI1_005134 Length:731 Species:Anopheles gambiae


Alignment Length:393 Identity:104/393 - (26%)
Similarity:156/393 - (39%) Gaps:86/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 QRSHQHIMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSWED-YASQLDGGM-KVEG---EED 138
            :.:.|..:||.|.|..:|....:.:......|.......::.|| ..:.:|.|. :.||   |.|
Mosquito    27 KEAKQEKLDMEDVELISAGLEDDDEGGCYFVDQKGNYYFQANEDAELTAVDAGQTEFEGLTDEPD 91

  Fly   139 QQHQVITYVV----------------EDGDTDDTNMFDVHDPTQPVPNEIEEAETYAEYEEYELL 187
            :..:.::||:                ..||:.|..::|..||...|..|.|.|:.          
Mosquito    92 KSEEGVSYVLIMNDADKSTLVLNDEPSQGDSKDNEIYDFEDPDYIVQEEQEPAKK---------- 146

  Fly   188 TNENSPEIAQEKGSTGTDVATEEPPEE--EIAEDILDSDEDYDPTHAKPEK---CDRSGRKPVAY 247
            |........|..|||...........:  .::..:....||      :|.|   |:| |.|.:|.
Mosquito   147 TQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSED------RPHKCVVCER-GFKTLAS 204

  Fly   248 HKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKF-HSGVKPHECEICGRGFVQ 311
            .:|.....|     |.||..      |..|.|.:.|...|..|::: |:..:||:|..|....|:
Mosquito   205 LQNHVNTHT-----GTKPHR------CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVE 258

  Fly   312 NQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKM 376
            ..:|.||:.||||.:|::|.:|..|..|:...|:|.||||.|:||.||||...||.|::||.|||
Mosquito   259 LSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKM 323

  Fly   377 I-------------------------------HTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRI 410
            |                               ||.:||..|..|...|...|..::|.:||....
Mosquito   324 IHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEK 388

  Fly   411 TWR 413
            .:|
Mosquito   389 CYR 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871 1/7 (14%)
COG5048 <264..411 CDD:227381 59/178 (33%)
C2H2 Zn finger 274..294 CDD:275368 6/20 (30%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
C2H2 Zn finger 358..378 CDD:275368 13/50 (26%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
LOC1276238XP_061505437.1 None

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