DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and Mzf1

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_006539528.1 Gene:Mzf1 / 109889 MGIID:107457 Length:814 Species:Mus musculus


Alignment Length:174 Identity:65/174 - (37%)
Similarity:89/174 - (51%) Gaps:13/174 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 SGRKPVA-------YHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGV 297
            ||.:|.|       :.:.|...:..:...|.:|      :.|..||..:..:..||:|::.|:|.
Mouse   616 SGERPFACAECGQSFRQRSNLTQHQRIHTGERP------FACAECGKTFRQRPTLTQHLRVHTGE 674

  Fly   298 KPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCS 362
            ||..|..||:.|.|..:|.||..||||.:||.|..|...|...|..|:|.||||.|||:.|..|.
Mouse   675 KPFACPECGQRFSQRLKLTRHQRTHTGEKPYCCGECGLGFTQVSRLTEHQRIHTGERPFACPECG 739

  Fly   363 RTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETH 406
            ::|....||..|:.|||||:|:.|..|||.|.:...|..|..||
Mouse   740 QSFRQHANLTQHRRIHTGERPYACPECGKAFRQRPTLTQHLRTH 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 59/143 (41%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
zf-H2C2_2 287..311 CDD:290200 11/23 (48%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
zf-H2C2_2 315..338 CDD:290200 11/22 (50%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 345..367 CDD:290200 11/21 (52%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
zf-H2C2_2 370..394 CDD:290200 13/23 (57%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
Mzf1XP_006539528.1 SCAN 121..232 CDD:128708
COG5048 416..807 CDD:227381 65/174 (37%)
C2H2 Zn finger 438..458 CDD:275368
C2H2 Zn finger 466..486 CDD:275368
C2H2 Zn finger 494..514 CDD:275368
C2H2 Zn finger 522..542 CDD:275370
C2H2 Zn finger 567..587 CDD:275368
C2H2 Zn finger 595..615 CDD:275368
C2H2 Zn finger 623..643 CDD:275368 1/19 (5%)
C2H2 Zn finger 651..671 CDD:275368 6/19 (32%)
C2H2 Zn finger 679..699 CDD:275368 8/19 (42%)
C2H2 Zn finger 707..727 CDD:275368 7/19 (37%)
C2H2 Zn finger 735..755 CDD:275368 6/19 (32%)
C2H2 Zn finger 763..783 CDD:275368 7/19 (37%)
C2H2 Zn finger 791..811 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I4340
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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