DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and znf665

DIOPT Version :9

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001165008.1 Gene:znf665 / 100328608 XenbaseID:XB-GENE-6050027 Length:403 Species:Xenopus tropicalis


Alignment Length:211 Identity:68/211 - (32%)
Similarity:94/211 - (44%) Gaps:36/211 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 HAKPEKCDR--SGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKF 293
            |..|| |.:  |||..:..|        ::...|.||      ::|..||..:..:.|||||...
 Frog    16 HECPE-CGKRFSGRNKLTIH--------YRVHTGEKP------FMCTKCGKSFREKHRLTEHQLI 65

  Fly   294 HSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVC 358
            |:|.||..|..||:.|.:.|.|..|...|||.:|:.|..|..:|..:...|.|..|||.|:|::|
 Frog    66 HTGEKPFMCTECGKSFRKKQSLTAHQLIHTGEKPFMCTECGKSFRQKHQLTAHQLIHTGEKPFMC 130

  Fly   359 DVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKAE 423
            ..|.::|.....|..|::||.||||.:|..|||.|.:...|..|:..|.                
 Frog   131 TECGKSFRQKHRLTAHQLIHMGEKPFMCTECGKSFRQKQLLTQHQLIHT---------------- 179

  Fly   424 DVKGETPEFLNELPKE 439
               ||.|....|..|:
 Frog   180 ---GEKPYACTECDKQ 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871
COG5048 <264..411 CDD:227381 54/146 (37%)
C2H2 Zn finger 274..294 CDD:275368 8/19 (42%)
zf-H2C2_2 287..311 CDD:290200 12/23 (52%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
zf-H2C2_2 315..338 CDD:290200 8/22 (36%)
C2H2 Zn finger 330..350 CDD:275368 5/19 (26%)
zf-H2C2_2 345..367 CDD:290200 9/21 (43%)
C2H2 Zn finger 358..378 CDD:275368 5/19 (26%)
zf-H2C2_2 370..394 CDD:290200 12/23 (52%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
znf665NP_001165008.1 COG5048 15..392 CDD:227381 68/211 (32%)
C2H2 Zn finger 18..38 CDD:275368 7/28 (25%)
C2H2 Zn finger 46..66 CDD:275368 8/19 (42%)
C2H2 Zn finger 74..94 CDD:275368 7/19 (37%)
C2H2 Zn finger 102..122 CDD:275368 5/19 (26%)
C2H2 Zn finger 130..150 CDD:275368 5/19 (26%)
C2H2 Zn finger 158..178 CDD:275368 7/19 (37%)
C2H2 Zn finger 186..206 CDD:275368 2/7 (29%)
zf-H2C2_2 198..223 CDD:290200
C2H2 Zn finger 214..234 CDD:275368
C2H2 Zn finger 242..262 CDD:275368
C2H2 Zn finger 270..290 CDD:275368
C2H2 Zn finger 298..318 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
C2H2 Zn finger 354..374 CDD:275368
C2H2 Zn finger 382..402 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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