DRSC/TRiP Functional Genomics Resources

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Protein Alignment trem and ZSCAN30

DIOPT Version :10

Sequence 1:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_047293222.1 Gene:ZSCAN30 / 100101467 HGNCID:33517 Length:601 Species:Homo sapiens


Alignment Length:417 Identity:101/417 - (24%)
Similarity:167/417 - (40%) Gaps:111/417 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LTCQ------RSHQHIMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSW---------EDYAS 125
            |.||      .|.:.|:::|..|          ..|:|     :...|::|         |:..:
Human   179 LCCQWLRPEVHSKEQILELLMLE----------QFLAI-----LPEELQAWLREHRPENGEEAVT 228

  Fly   126 QLDGGMKVEGEEDQQ----HQVITYVVEDGDTDDTNMFDVHDPTQPVPN----EIEEAETYAEYE 182
            .|: .::.|.||.:|    |....:..|...|.......::.|.||:.|    |.:|::.:.|.:
Human   229 MLE-ELEKELEEPRQQDTTHGQEMFWQEMTSTGALKSLSLNSPVQPLENQCKTETQESQAFQERD 292

  Fly   183 -----------EYELLT---------------NENSPEIAQE-----------KGSTGTDVATEE 210
                       :.|::.               ..:|..||:|           ||:...:..::.
Human   293 GRMVAGKVLMAKQEIVECVASAAMISPGKLPGETHSQRIAEEALGGLDNSKKQKGNAAGNKISQL 357

  Fly   211 PPEEE------------IAEDILDSDEDYD--------------PTHAKPEKCDRSGRKPVAYHK 249
            |.::.            ....:|:|.|...              .|..|..:|...|:   |:.:
Human   358 PSQDRHFSLATFNRRIPTEHSVLESHESEGSFSMNSNDITQQSVDTREKLYECFDCGK---AFCQ 419

  Fly   250 NSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQ 314
            :|..:...:...|.:|      |.|..||..:...:.|..|.:.|||.||:||..||:.|..:.:
Human   420 SSKLIRHQRIHTGERP------YACKECGKAFSLSSDLVRHQRIHSGEKPYECCECGKAFRGSSE 478

  Fly   315 LVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHT 379
            |:||...|||.:||:|..|..||:..|...:|.:|||.::.|.|..|.:.|..|..|..|:.|||
Human   479 LIRHRRIHTGEKPYECGECGKAFSRSSALIQHKKIHTGDKSYECIACGKAFGRSSILIEHQRIHT 543

  Fly   380 GEKPHVCDLCGKGFVKAYKLRLHRETH 406
            ||||:.|:.|||.|.::..|..|:..|
Human   544 GEKPYECNECGKSFNQSSALTQHQRIH 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tremNP_650861.1 zf-AD 11..87 CDD:214871 5/16 (31%)
COG5048 <264..411 CDD:227381 56/143 (39%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
ZSCAN30XP_047293222.1 SCAN 151..261 CDD:128708 20/97 (21%)
COG5048 388..>467 CDD:227381 20/87 (23%)
C2H2 Zn finger 410..430 CDD:275368 4/22 (18%)
COG5048 <435..586 CDD:227381 56/142 (39%)
C2H2 Zn finger 438..458 CDD:275368 5/19 (26%)
C2H2 Zn finger 466..486 CDD:275368 7/19 (37%)
C2H2 Zn finger 494..514 CDD:275368 6/19 (32%)
C2H2 Zn finger 522..542 CDD:275368 6/19 (32%)
C2H2 Zn finger 550..570 CDD:275368 7/19 (37%)
zf-C2H2 576..598 CDD:395048
C2H2 Zn finger 578..598 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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