DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4854 and TT1

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_174737.2 Gene:TT1 / 840386 AraportID:AT1G34790 Length:303 Species:Arabidopsis thaliana


Alignment Length:257 Identity:55/257 - (21%)
Similarity:85/257 - (33%) Gaps:92/257 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 DLSKNEATGSDSELEYEYLDSYDVTLESSEDVACSADELVSIEPAISAPEESVYSLSPKP----V 165
            ||:.|.....:.|.|.|.        |..||.....|..:.: |....|......|..:.    .
plant    58 DLNPNPLYAEEGEQEEEE--------EEEEDREVDVDLHIGL-PGFGKPSNDAKQLKKRNGKEIA 113

  Fly   166 TF------EDEDSGQA-------------ASFTCNICNNVYSERVKLTNHMKVHSAKKPHECEIC 211
            |:      |:|.||:|             ..|:|::|...::....|..||..|.:         
plant   114 TYDAGKGIENELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGS--------- 169

  Fly   212 HKRFRQTPQLARHMNTHTGNRP--------YKC-DYCDSRFADPSTRIKHQRIHTNERPYKCEFC 267
              ::|:.|:..:      |.:|        |.| :.|       ...|.|.|    .:|.| :| 
plant   170 --QYRKGPESLK------GTQPRAMLGIPCYCCVEGC-------RNHIDHPR----SKPLK-DF- 213

  Fly   268 SRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKS--------------HKRT 315
                   ..|:.|.|...|.:||||:.|.|..:......:|||:              |||:
plant   214 -------RTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
zf-H2C2_2 193..217 CDD:290200 4/23 (17%)
COG5048 201..>258 CDD:227381 10/65 (15%)
C2H2 Zn finger 208..228 CDD:275368 2/19 (11%)
zf-H2C2_2 221..244 CDD:290200 5/31 (16%)
C2H2 Zn finger 236..256 CDD:275368 5/20 (25%)
zf-H2C2_2 251..273 CDD:290200 5/21 (24%)
C2H2 Zn finger 264..284 CDD:275368 4/19 (21%)
zf-H2C2_2 277..301 CDD:290200 10/23 (43%)
C2H2 Zn finger 292..312 CDD:275368 6/33 (18%)
TT1NP_174737.2 C2H2 Zn finger 231..247 CDD:275368 3/15 (20%)
C2H2 Zn finger 257..274 CDD:275368 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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