DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4854 and ZNF408

DIOPT Version :9

Sequence 1:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_079017.1 Gene:ZNF408 / 79797 HGNCID:20041 Length:720 Species:Homo sapiens


Alignment Length:353 Identity:82/353 - (23%)
Similarity:127/353 - (35%) Gaps:86/353 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVQPKDESLMPTEPDFPDKIKRCTGV-ELSESPDWP---------NRICTSC--ALLLRAALKLR 68
            |..|.|:  .|.....|:...:.:|. .||.||..|         ...|..|  |.|....||..
Human   309 LHSPSDQ--CPPRAKTPEPGAQQSGFPTLSRSPPGPAGSSPKQGRRYRCGECGKAFLQLCHLKKH 371

  Fly    69 S---------LCQQ------TEKDLKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDSEL 118
            :         ||.:      :|:..|...|....:......|..|.....|||.:::...|    
Human   372 AFVHTGHKPFLCTECGKSYSSEESFKAHMLGHRGVRPFPCPQCDKAYGTQRDLKEHQVVHS---- 432

  Fly   119 EYEYLDSYDVTLESSEDVAC-SADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAASFTCNI 182
                         .:...|| ...:..:..|::.. ....:.:...|           |...|.:
Human   433 -------------GARPFACDQCGKAFARRPSLRL-HRKTHQVPAAP-----------APCPCPV 472

  Fly   183 CNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRF---- 243
            |....:.:..|.|||::|:.:||..|..|.:.|||...|..|:..|||.|||:|.:|...|    
Human   473 CGRPLANQGSLRNHMRLHTGEKPFLCPHCGRAFRQRGNLRGHLRLHTGERPYRCPHCADAFPQLP 537

  Fly   244 -----------------------ADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHT 285
                                   .||.|...|:|:|:.|||:.|..|.|::..:..||.|||:|.
Human   538 ELRRHLISHTGEAHLCPVCGKALRDPHTLRAHERLHSGERPFPCPQCGRAYTLATKLRRHLKSHL 602

  Fly   286 GERPFSCQYCQKSFSQLHHKNSHEKSHK 313
            .::|:.|..|...::.......|:.||:
Human   603 EDKPYRCPTCGMGYTLPQSLRRHQLSHR 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 12/50 (24%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
zf-H2C2_2 193..217 CDD:290200 10/23 (43%)
COG5048 201..>258 CDD:227381 24/83 (29%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
zf-H2C2_2 221..244 CDD:290200 11/49 (22%)
C2H2 Zn finger 236..256 CDD:275368 8/46 (17%)
zf-H2C2_2 251..273 CDD:290200 9/21 (43%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
zf-H2C2_2 277..301 CDD:290200 9/23 (39%)
C2H2 Zn finger 292..312 CDD:275368 3/19 (16%)
ZNF408NP_079017.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..350 11/42 (26%)
COG5048 <308..516 CDD:227381 49/237 (21%)
C2H2 Zn finger 355..375 CDD:275368 6/19 (32%)
zf-H2C2_2 367..392 CDD:290200 4/24 (17%)
C2H2 Zn finger 383..403 CDD:275368 4/19 (21%)
C2H2 Zn finger 411..431 CDD:275368 5/19 (26%)
zf-H2C2_2 423..448 CDD:290200 5/41 (12%)
C2H2 Zn finger 439..490 CDD:275368 10/62 (16%)
COG5048 <475..642 CDD:227381 47/156 (30%)
zf-H2C2_2 482..507 CDD:290200 10/24 (42%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 510..533 CDD:290200 10/22 (45%)
C2H2 Zn finger 526..546 CDD:275368 3/19 (16%)
C2H2 Zn finger 553..573 CDD:275368 5/19 (26%)
zf-H2C2_2 566..589 CDD:290200 9/22 (41%)
C2H2 Zn finger 581..601 CDD:275368 8/19 (42%)
zf-H2C2_2 594..617 CDD:290200 9/22 (41%)
C2H2 Zn finger 609..629 CDD:275368 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.